Silene latifolia (white campion): 141605715
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Entry
141605715 CDS
T11116
Name
(RefSeq) protein TRANSPARENT TESTA 9 isoform X1
KO
K19513
protein CLEC16A
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141605715
03029 Mitochondrial biogenesis [BR:
slaf03029
]
141605715
Membrane trafficking [BR:
slaf04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
141605715
Mitochondrial biogenesis [BR:
slaf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
141605715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FPL
CLEC16A_C
Motif
Other DBs
NCBI-GeneID:
141605715
NCBI-ProteinID:
XP_074280691
LinkDB
All DBs
Position
10:complement(87105884..87130744)
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AA seq
844 aa
AA seq
DB search
MWSFWKSRNRFSLDELKYLTDQLQKVQVVNEVNKDFVIEALRSIAELVTYGDQHDAAFFD
FFMEKQVLGEFVRILKISRTIMVSLQLLQTMSIMIQNIKHEHAIYYLFSNEHINYLITYS
FDFRNEELLSYYISFLRAISGHLNKGTISLLVKTQDDDVVCFPLYDEAIRFASHEESMIR
IAVRALTLNVYHVGDESVNKYVTSGPLGEYFVGLVSFFKKQCVMLNDLVFGASKEHSQET
SSSIIASMDEIEDNLYYFSDVISAGIPDVDSLITDNLLRLLILPLLLPSLTIEADMPIGA
VTSLYLLCCILRIVKIKDLANTVCASLFCTRDVFLSIHGTKSNGDLTFHKVQHTSSKEQN
GATLEGGRNLEVFIPDNTSLQDSSNDVQLSLREVVLSYLNIGSDIQALGSLSLMATLLQT
KELEESMLDALGILPQRKQHKKLLLQALVGESSGEEQLFSSGSNSLRGGFTSELDFYLQK
LKVVAASEYGVSYSAVDKKSSPRSCRFQVLDALVNLLCRSDISAETLWDCGWLLRQLLPY
SEAEFNRQHLKLLRESFDKYSSHLLLETRGAWADFLISVICDEWRKCKKAMESSSPRKEL
RCMVSPSYSEGVVSSESSTVGERMCEVVKAFVLLCQLQIFSQGRTLPDNAPTYLPGDIPK
DSRAIAIGVDIAGPKQGIELKLEDAIPCRIAFERGKERYVWFQAVSMGTGGWVMLLEELP
LRQNVGVVRVVAPLAACNPRVDDKHPRWLHLRIRPPTLQAVVPLKYGQSVQVKGRTLVDG
RWTLAFRDEESCKSAVSRIYNEFNLQSQEVERRLTPLVHPENCTDPSTLSFTPLETITLP
PNTL
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtggtccttctggaaatcccgtaatcgattctccttggatgaacttaaatatctaact
gatcagctacaaaaggttcaagttgtgaatgaagttaacaaggattttgttattgaagca
ctcagatcgattgcggaattggtaacttacggagaccagcatgacgcagccttcttcgat
ttttttatggagaagcaagtcctgggggagttcgtacgtattttgaagatcagtagaact
atcatggtttcgctacagttacttcagaccatgagcatcatgatacaaaacataaaacat
gagcatgctatatattatcttttcagtaatgagcacattaactacctcataacttattca
tttgactttcgtaatgaagagctattatcatattatatatctttcttgagagctataagt
gggcatctgaacaagggcacaatatccttgctcgtaaaaactcaggatgatgatgttgtc
tgctttcctttatatgatgaagctatccgatttgcttcacatgaagagagcatgatacgt
attgctgtacgtgcactaactctcaatgtttaccatgttggagatgagagtgtaaataaa
tatgttaccagcggaccgcttggcgagtactttgttggccttgtttccttctttaagaag
cagtgtgtcatgttaaatgacttggtcttcggtgcttcaaaggaacatagtcaagaaacg
tcttcaagtataattgcttccatggatgaaatcgaagacaatttgtactattttagcgat
gttatctcagcgggaatcccagatgttgatagtttgataacagacaatttgttgcggctt
ttgatattgcctttgttgctgccttctctgacaattgaagctgatatgccgattggagca
gtcacatcattatatctactttgttgcatattgaggatagtcaaaatcaaagatttggcg
aatacagtttgtgcatctctgttttgtacgcgtgatgtctttttgtccattcatggtact
aaatcaaatggcgatttgacctttcacaaagttcagcatacatcatctaaagagcaaaat
ggtgctactttagagggtggaagaaatttggaagttttcattcctgacaataccagcttg
caagatagttccaatgatgtgcaactgtctctgagggaggttgtactatcttatcttaat
attggcagtgatatacaagccttgggatctctaagtttaatggctactttgttgcaaacc
aaagaactggaagagtcaatgctagatgcacttggaattcttcctcagcggaaacaacac
aaaaagctcttactgcaagctttggtcggtgagagctctggtgaagaacagctattttca
tccggaagtaactcgctcaggggtggatttactagtgagctggatttctacttacaaaaa
ctcaaggttgtagcagcgtctgaatatggagtttcttattctgcagttgacaaaaagtct
agccctcgttcatgcagatttcaggtgcttgatgctttggttaatctgctgtgtcgatct
gatatatcagctgagactttgtgggactgtggttggctcttacgtcagctgcttccttac
agcgaagccgagttcaataggcagcatcttaaactacttagagaatcttttgataaatat
tccagtcatcttctactggagactagaggagcgtgggctgatttccttatctcagtcatt
tgtgacgaatggagaaagtgtaaaaaagcaatggagtcttcttcacccaggaaagagctc
agatgcatggtgtctccatcgtattctgaaggtgtcgtttcaagcgaatcatcaacagtt
ggagagagaatgtgtgaagttgtgaaggcgtttgttcttctttgtcaactgcaaatattc
tcacaaggcagaacattgcctgacaacgcaccaacatatctcccaggtgacataccaaaa
gactctcgagctattgctattggtgtggatatagccggtccaaagcaaggcattgagttg
aaacttgaagatgctattccttgtcgaattgcatttgaaagaggtaaagaacgttatgtt
tggtttcaagcggtgtcaatgggtactggtggttgggttatgctgttggaagagcttcct
ttgcgacaaaatgtgggagttgttcgagttgttgcacctttagcggcctgtaatccgaga
gtggatgataagcacccgagatggttacatctaaggatccgtccaccaacattacaggca
gtcgttcctttgaaatatggtcaatctgtacaagtgaaggggcggactttagtagacggt
aggtggactctagcatttagggatgaagaatcttgcaaatctgctgtgtccaggatttac
aacgagttcaatctacaaagtcaagaggtagagcggcggctaacccctcttgtacatcct
gaaaattgtacagatccttcaaccctttcatttactcctctagaaacaataacccttcct
cccaataccttgtaa
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