Silene latifolia (white campion): 141605742
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Entry
141605742 CDS
T11116
Name
(RefSeq) zinc finger CCCH domain-containing protein 64 isoform X1
KO
K24939
CWF19-like protein 1
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141605742
Spliceosome [BR:
slaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141605742
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_4
zf-CCCH_3
zf-CCCH_10
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
141605742
NCBI-ProteinID:
XP_074280724
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Position
10:complement(92643075..92664057)
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AA seq
606 aa
AA seq
DB search
MATTPRLLLSGDVLGRLSLLYKRFTSVNKSAGPFDAILCVGQFFPDTTDQLQEFMDYIDG
RREIPIPTYFIGDYGVASPKVLSAAANEPGNLGFKMDGLKVCPNLYWLKGGGSFTLHGLS
VAYLSGRQSPSGHQFGKYTQDDVDALRAFVEEPGIPDIFLTNEWPKGVTNRVSSEDVPSE
TFDSSCCDSTVAELVVGIKPRYHIAGSKGVFYAREPYANEDALHVTRFFGLAPVGNKEKQ
KFMHAISPTPSSTMSASEISLKPPNTTLCPYKIDDNTASRETNKRPGDSNPEAQYWRYDV
KKRGHGAPESERFCFKFLSSGSCPRGENCSFRHDAEAREQSMRGVCFDFLNKGKCERGSE
CQFLHNLVDEGEGVSRKKPKSGGAIDIRSKECWFCLSSPHLESHLIISVGEHLYCAMAKG
PLVDDHVLLIPIEHSSSTLSLTPDGQRELFRFQCSLRTFCKTQGKEVVFFEWITKRGMHA
NLQAIPIPQTRASAIKTIFNLAAKRLGFDFETIKNDDASEGRELLISKFDGQTGFFYVEL
PDGTVLGHIVEENENFPFQFGREVLSGLLKIPDKADWRNCKVSKDEEVIMVEAFKSQFKA
FDPNEA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggctactactccacgcctccttctctccggcgacgtcctcggccgtctctccctcctc
tacaaacgcttcacctccgtgaataaatccgcaggtcctttcgacgctatactatgcgtc
ggccagttctttcccgacacaacggatcaattacaagaattcatggattacattgatggc
cgtcgagaaatccctattcctacttactttatcggcgattatggtgttgcctcccccaaa
gtactttccgccgccgcaaatgaacctggaaatttagggtttaaaatggacgggttgaag
gtttgccctaatttgtattggttgaaaggtggcggtagcttcactctacatgggttatct
gtggcgtacttgtctggtaggcaatcaccaagcgggcatcaatttggaaagtatactcaa
gacgatgtcgatgcgctacgggcattcgtagaggagcctggaatacctgatatattcctt
actaatgaatggcccaagggcgttacaaatagagtttcttctgaagatgtaccatcagag
acatttgactcctcttgttgcgattccacggttgcagagttagtggtagggattaagcca
cgctatcatattgcaggttctaaaggtgtcttctatgctcgggagccatatgctaatgag
gatgcactacacgttactcgtttctttggcctcgctcctgtaggaaataaagagaaacag
aaatttatgcatgcaatatctccaactccttcatcaactatgtcagcttcagaaataagt
ttgaagcctcctaatacgactttatgtccatacaaaattgatgataacactgcttctaga
gagacaaataagagacctggcgacagtaatcccgaagcacaatattggcgttatgatgtg
aaaaagcgcggacatggcgctccggaatcggagagattttgtttcaaatttttgtcgtca
ggttcttgcccacgaggtgaaaattgttctttccgacatgatgcagaagcgagagagcaa
tctatgagaggagtatgcttcgattttctcaataaagggaaatgtgaaaggggttcagag
tgtcaatttctgcataatctagttgacgaaggtgaaggtgtatcaaggaagaaaccaaaa
tctgggggagcaattgacatcagatcaaaagaatgctggttttgcttgtcaagcccccat
ttggaatctcatttaatcattagtgttggagaacacttatattgtgcaatggcaaaaggc
ccacttgtcgatgatcatgtgctattgattccgattgagcattcttctagtactttatca
ttaactccggatggtcaacgggagctttttaggtttcaatgcagtcttcggacgttctgc
aaaacccaagggaaggaagttgttttctttgagtggatcacgaaacgtggaatgcatgct
aatctccaggctataccgattcctcagaccagggcatctgctatcaagaccatctttaac
ttggctgccaaaagattgggatttgattttgagacaattaaaaatgacgatgcgtctgaa
gggagagagctgttgatatcgaagtttgatggccagacgggtttcttctatgtggagcta
cctgatggaacagtactgggacatattgttgaagagaatgagaacttccctttccagttt
ggccgtgaggtcctatctggcttactgaaaatccccgataaggctgactggaggaattgt
aaagttagcaaagacgaggaggtaataatggtagaagctttcaagtctcagttcaaagcg
tttgatcccaatgaagcctga
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