KEGG   Silene latifolia (white campion): 141605943
Entry
141605943         CDS       T11116                                 
Name
(RefSeq) ras-related protein Rab5-like
  KO
K07887  Ras-related protein Rab-5A
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf04144  Endocytosis
slaf04145  Phagosome
slaf04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    141605943
   04145 Phagosome
    141605943
   04148 Efferocytosis
    141605943
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:slaf04131]
    141605943
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:slaf04147]
    141605943
   04031 GTP-binding proteins [BR:slaf04031]
    141605943
Membrane trafficking [BR:slaf04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    141605943
 Endosome - Lysosome transport
    141605943
Exosome [BR:slaf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   141605943
  Exosomal proteins of other body fluids (saliva and urine)
   141605943
  Exosomal proteins of colorectal cancer cells
   141605943
  Exosomal proteins of bladder cancer cells
   141605943
GTP-binding proteins [BR:slaf04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    141605943
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase Gtr1_RagA AAA_24 AAA_22 AAA_16 TsaE MMR_HSR1 ELMO_CED12 ATPase DUF4334
Other DBs
NCBI-GeneID: 141605943
NCBI-ProteinID: XP_074280980
LinkDB
Position
10:complement(129807607..129810630)
AA seq 200 aa
MTNIGGKNIQAKLVLLGDVGTGKTSLVLRFVKGQFYDCQESTIGAAFFTEVVSLKEATVK
FDIWDTAGQERYQSLAPMYYRGAASAVVVYDISNAKSFQKAKKWVEELHRQGSPHMFKVL
VGNKADLDHNREVETEVGEQYAQENGLQFFETSAKTAHNVNDLFFEIAKALARTWKSRGP
TGMTLQNRQQGGPRLFCCSS
NT seq 603 nt   +upstreamnt  +downstreamnt
atgacgaacattggaggcaagaacattcaagcaaagctggtacttcttggagacgtagga
acagggaaaacaagcttagtgttgagatttgtcaaaggccaattctatgactgtcaggaa
tcaacaataggagcagcatttttcacagaggtggtatccttaaaagaagcaaccgtgaaa
ttcgacatatgggatactgctggacaagaacgttaccaaagcttggctcctatgtactac
cgtggtgctgcttctgccgttgtcgtctacgacatctccaatgccaaatcatttcagaaa
gcgaaaaaatgggttgaagaattacatagacaaggaagtcctcatatgtttaaggttctg
gttggcaacaaagcagaccttgatcacaacagagaagtggagacggaggtcggcgagcaa
tatgctcaagaaaatggattgcaattctttgaaacatctgccaagactgcacataatgtc
aatgacctcttttttgaaatcgcaaaagcattggcaagaacatggaagtctcgtggtccg
actggaatgacattacaaaacaggcaacaaggcggaccaagactgttttgctgttccagc
tga

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