Silene latifolia (white campion): 141606159
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Entry
141606159 CDS
T11116
Name
(RefSeq) cysteine protease ATG4-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
141606159
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slaf01002
]
141606159
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141606159
03029 Mitochondrial biogenesis [BR:
slaf03029
]
141606159
Peptidases and inhibitors [BR:
slaf01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
141606159
Membrane trafficking [BR:
slaf04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
141606159
Mitochondrial biogenesis [BR:
slaf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
141606159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
141606159
NCBI-ProteinID:
XP_074281285
LinkDB
All DBs
Position
10:144557735..144564761
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AA seq
475 aa
AA seq
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MKNLLDKISTSKSSSTDLSPKLKRSLSSSSCSGSSSGSSLLPAIVVSAFSGYESGRKSKG
QGLSSGNGWGATVKRIMASGSIRRIKETMLGYYKSSVVVSSSDIWLLGVCYKVHDDSTGG
DPAASAGFAAFVEDFSSRILMTYRKGFNPIGESKYTSDVNWGCMLRSSQMLVAQALIMHR
FGRSWRKAVNKQLDEGYTEILIDFGDYEESAFSIHQLLEVGKGYGLAAGSWVGPYAMCRA
WETLARGEKEKGSKLLPMAVYIVSGDEDGERGGAPVVCVEDVSDCCLKYSGGQADWAAVL
LLVPLVLGLEKINPRYVPLLKATFAFPQSLGILGGKPGVSTYIIGVQDDNAFYLDPHEAQ
PVVDIKKGDLEADTSSYHSNVVRHVPLESIDSSLAIGFYCRDRDDFDDFCSRASTLADES
NGAPLFTVAHCRSSPRATNQGDMAGGVADVQYDDSYDVLHSTNPEGEHEDDWQLL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttgttggataaaattagtacttctaaatcgtctagcactgatttatcgccg
aaattgaagcgcagtttgtcgagttcttcgtgttcaggttcgagttcaggttcgtcgttg
ctgcctgcgatagtagtttctgcgttttctggttacgagagcggcaggaagtctaaaggg
caaggactgagtagtggtaatggttggggagcgactgtgaagagaattatggcgagtgga
tcgattaggaggattaaggagactatgttggggtactataagtcgagtgtcgtcgtgtcg
tctagtgatatatggctattgggtgtttgctataaggtccatgatgattctactggtggt
gatcctgctgctagtgctgggtttgctgcttttgttgaggacttctcgtcgaggattttg
atgacgtataggaaagggtttaatccaattggggagtcaaagtataccagtgatgttaat
tggggctgcatgcttcggagcagtcaaatgcttgttgctcaagcgttgattatgcatcgg
tttggaaggtcttggaggaaggccgtgaataagcaacttgatgaaggctacactgaaata
ctgattgactttggtgattatgaggagtcagcgttctctattcaccaacttttggaagtt
ggaaagggttatgggctcgctgctgggtcatgggtaggcccctacgcaatgtgccgtgct
tgggaaacgttggcccgaggtgaaaaggagaagggtagcaaattattgccaatggctgtc
tacattgtgtctggtgatgaggatggcgaaagaggcggggctcctgttgtctgtgtagaa
gatgtgtcggattgttgccttaaatattcaggagggcaggctgattgggcagctgttctt
ttgctggttcctctcgtgcttggtctagagaaaattaatcccaggtatgttcctctactg
aaggctacgtttgcatttcctcagagtcttggcatcttgggtgggaaacctggtgtttca
acttacatcattggtgtgcaagatgacaatgcattctacctggatccccatgaagctcag
ccagtggtcgacataaaaaagggagacctagaagctgatacatcatcctaccacagcaat
gtggttcggcacgttccattggagtctattgattcatctttggcgattggattttactgc
agagacagagatgactttgacgatttctgctctcgagcttctacgctggcggatgaatcg
aatggtgcaccactgttcacggttgctcattgccgtagctcccccagggcaacgaatcaa
ggagatatggctggtggcgttgctgatgttcaatatgatgattcttatgatgtgctccat
tcgaccaaccccgagggtgaacacgaggatgattggcaattgctctga
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