Silene latifolia (white campion): 141606414
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Entry
141606414 CDS
T11116
Name
(RefSeq) starch synthase 1, chloroplastic/amyloplastic-like
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00500
Starch and sucrose metabolism
slaf01100
Metabolic pathways
slaf01110
Biosynthesis of secondary metabolites
Module
slaf_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
141606414
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
slaf01003
]
141606414
Enzymes [BR:
slaf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
141606414
Glycosyltransferases [BR:
slaf01003
]
Polysaccharide
Storage polysaccharide
141606414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Phage_capsid
FMN_bind
Motif
Other DBs
NCBI-GeneID:
141606414
NCBI-ProteinID:
XP_074281632
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All DBs
Position
10:complement(153017062..153025067)
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AA seq
724 aa
AA seq
DB search
MESLSLNSCNFKGFNRSTALNLSRKVEIRGFNHVGFACFWRQSEKRLSFAVRTKSSGNDA
GFSASSKDGSSSKLSTVETEVEDEGQKGHLIGPITDSDGSIVGFRLLSPSDEKDLVKYNA
YETLNLDKQDEVQEEDYGEEKENPKVSEETTSEVEEISSASVSSSSIAEQEVLEDTEVVE
EEVVEDEVADEIAEVEEESVVKGEVTTPSKVTYNIVFVTSEAAPYSKTGGLGDVCGSLPI
SLAARGHRVMVVSPRYIHGTAADKVYAGAFDANCRIKVNCFGGEQEVAFFHEYRAGVDWV
FVDHPSYHRPGNPYGDSSGAFGDNQFRFTLLSHAACEAPLVLPLGGYTYGQKCLFLVNDW
HAGLVSVLLASKYRPYGVYKDARSVLVIHNLSHQGVEPAVTYDNLGVPPHWYGVLEWVFP
EWARAHELDKGEAVNILKGAIVTSDRILTVSQGYSWEVTTVEGGYGLHELLTSRKFVLNG
IINGIDVNEWNPSTDVHIPAHYSIDDLSGKAECKIALQKELGLPIKPECPLIGFIGRLDY
QKGIDIIQAAMPELLQDDVQFVMLGSGDSKYENWMRATEAAYKDKFRGWVGFNVPISHRI
TAGCDILLMPSRFEPCGLNQLYAMRYGTVPVVHCTGGLRDTVETYNPFSIGPDGTGTGTG
WAFAPLAKDSMLASLRNALKTYREYKPSWAGLMKRGMERDSTWDSAAAQYEQIFGWALTD
PPYC
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggagtctttatcattaaattcatgtaatttcaagggttttaatcgatctacagcactt
aatttatctagaaaagtagagattagagggtttaatcatgtgggttttgcttgtttttgg
agacaaagtgaaaaaagactgtcttttgcagtaagaactaagtcttctggtaatgatgct
gggttttctgcttctagtaaagatgggtcttcttctaaattatcaactgttgagacagag
gttgaagatgaagggcaaaaaggtcatttgattggtcctatcactgattctgatgggtcc
attgttgggtttcgcctgctttctccatcagatgaaaaagatctggttaagtataatgct
tatgaaacactgaatctggataagcaagacgaagtacaagaagaagattatggtgaagaa
aaagaaaatccgaaagtaagtgaagagactaccagtgaagtagaggaaatttcctccgcc
agcgtgtcttccagtagcatcgctgaacaagaagtacttgaagataccgaggttgtggaa
gaagaggttgtagaagacgaggttgcagatgaaatagcggaagtagaagaagaaagtgtg
gttaaaggagaagtaacaactcccagcaaagtaacctacaatatcgtctttgtaacatca
gaggcagcaccttattccaagaccggaggtttgggagatgtgtgtggttctttgcctatc
tctctagctgcacggggacatcgtgttatggtagtgtcacctagatatatacatgggact
gctgctgataaggtttatgctggagcctttgatgccaactgtcgtatcaaggtcaattgc
ttcggtggggaacaagaagtagcctttttccatgagtacagagctggtgttgattgggta
tttgttgatcatccgtcatatcaccgacccggaaatccctatggcgatagctcaggcgcc
ttcggcgataatcagttccgattcactttgctttcccatgcagcctgtgaagcacctctt
gtcctaccacttggaggctacacctatggacaaaagtgtttgttccttgtcaatgattgg
cacgcaggtcttgtatcagtacttttggcatctaaataccgtccatatggagtatacaag
gatgcacggagtgtacttgttatacacaacctttctcatcaaggtgtggagcctgcagtt
acatacgataacttaggagtgcctcctcattggtacggggtacttgagtgggtgtttcca
gagtgggcaagagcacatgaacttgacaaaggtgaagctgtcaacattctcaagggggca
attgtgacgtctgatcggattcttacagttagccagggatattcgtgggaagtaacaact
gtggagggtggatatggtttgcacgagttactaaccagccgaaaatttgttctgaatggg
attataaatggtatagacgtaaatgaatggaatccatctaccgatgttcatattccagcc
cattactccatcgatgatctctctggaaaggctgaatgcaaaattgccttgcaaaaggag
cttggtcttcctatcaaacctgaatgcccattgattggatttattgggagactcgactac
cagaaaggcattgatattattcaagcagccatgccggagcttctgcaagacgatgtgcag
tttgttatgttgggctcaggagactcaaaatatgagaattggatgagagcgactgaggcg
gcatacaaagacaagtttcgaggatgggttgggttcaatgtcccaatatctcatcgaata
actgcagggtgtgatatccttttgatgccatcaagatttgaaccttgtggactaaatcag
ctatatgcaatgagatatggaactgtgccggtagttcattgtactggaggacttcgggat
actgttgaaacgtacaatccattttcaattgggcctgatggcaccggcactggtactggg
tgggcctttgctcccttagcgaaggacagtatgttggcgtctttgagaaatgccctgaaa
acataccgtgaatacaagccttcatgggccgggttgatgaagagaggcatggaaagagat
tcaacatgggacagtgctgcagcccagtacgagcagattttcggctgggccctaactgac
ccaccctactgctga
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