Silene latifolia (white campion): 141606424
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Entry
141606424 CDS
T11116
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141606424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141606424
Enzymes [BR:
slaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141606424
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
141606424
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
141606424
NCBI-ProteinID:
XP_074281641
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All DBs
Position
10:153080841..153085269
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AA seq
321 aa
AA seq
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MDIDSIECVSSVDGLEEEEIRQHLDTRHNHQHHNSNRQFSTKPKSNVLGPTSVHELLECP
VCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPCKYY
NLGCPEIFPYYSKLKHEAVCNFRPYNCPYAGSECSVVGDIPFLVAHLRDDHKVDMHAGCT
FNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDARN
YCYSLEVGGSGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT
GRIWKEQQNADAAPCMPNTGT
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggacattgatagcattgagtgtgtatcttcagttgatggtctggaggaagaagagatc
cgtcagcaccttgatacccgccacaaccaccaacatcataacagcaaccgccaattttcg
acaaagccgaaaagtaatgttttgggtcccactagtgtccatgagttgcttgaatgtcct
gtttgtaccaattctatgtatcctcctattcatcagtgccgtaatggacatacactgtgc
tccacctgtaaaactagggtgcaaaacagatgtccgacttgcaggcaagagcttggtgat
attcggtgcttagccctggaaaaggtggcagagtcacttgaactaccctgtaaatactac
aatttggggtgcccagagatatttccatattacagcaaactaaaacatgaggcagtgtgc
aatttcagaccttacaattgtccttatgctggatcagagtgctcggttgttggtgatatc
cctttcctcgttgcccatctcagggacgatcacaaggttgatatgcatgctgggtgtaca
ttcaatcatcgctatgtcaaatcaaatccccgtgaagtagaaaatgctacctggatgttg
actgtcttccattgttttggccaatacttttgtcttcacttcgaagcctttcaactcgga
atggcgccggtatacatggcattcctgcgcttcatgggcgacgaaaatgatgccaggaac
tactgttacagcctcgaggttgggggaagcgggaggaaactcatatgggaaggcacccca
cggagtattcgagatagccatcgaaaggtaagggatagccacgacggtcttatcatccaa
cgcaacatggcgcttttcttctccggtggggaccgcaaggagttgaagctgagggtgact
ggtaggatttggaaggagcagcagaacgctgatgctgctccttgcatgcctaatactggt
acttaa
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