Silene latifolia (white campion): 141606521
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Entry
141606521 CDS
T11116
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slaf03021
]
141606521
Transcription machinery [BR:
slaf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
141606521
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
141606521
NCBI-ProteinID:
XP_074281783
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Position
10:157075380..157080801
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AA seq
529 aa
AA seq
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MGVVTVSSSASRASLNLSGRVTLPQSNVKGPFILGFKADKPKKITLIGPNEPVCLHIEKK
KENRKKGRSVRKPSKARVGVADIAEASPCATELDLTEAAAKLESIFKISPTRENVAEENI
DGVRRKSRGNKRHGNDVDEKSGGNIDGGVVRNRKKKAKRLSLDKRIEMKKSKDLSNKKER
KSVKEEIAVPATREVKVCISEDEKIEELVREYSASTDLVSLDWKKMKIPPVLPSSEHTWL
FKLLELRKALLQVKENLQRELGRDPTDAELGQATNMTVIQVRRKMEAGHAARNKLIKHNL
RLVLFVMNKYFQDFTNGPKFQDLCQAGVKGLIIAIDRFEPKRKLRLSTYALFWIRHAIIR
SMTVSSFTRVPFGLESVRMEIQKAKLELMFELKRMPTDEEVTNRVGISLERYHEVMRAAN
SVASLHSKNRVTQEEFIDGITDIDGVGGDKRKQPALLRLALDDVLDSLKPKESLVIRQRY
GLDGKGDRTLGEIAGNLNISREMVRKHEMKALMKLKHPARMDYLRHHIH
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtatccagctcagcctctcgagcatctttgaacctaagtggacga
gtgactcttcctcagtctaatgttaagggaccctttatattgggattcaaagcggacaaa
ccgaaaaagattaccttaattggaccgaatgagccagtttgtttacacatagagaaaaag
aaggagaatagaaagaaaggaagatcggtaagaaaaccttctaaagcaagagttggggtt
gctgatatagctgaagcttcgccatgtgctactgaattagatctgactgaagcggcagct
aagctggaaagcattttcaagattagccctaccagggaaaatgtagctgaagagaacatt
gacggtgtcagaagaaaaagccgagggaacaaaagacatggcaatgatgttgatgagaag
tcgggagggaatattgatggaggtgtggtgaggaataggaaaaagaaagcaaagcgattg
agtcttgataagagaattgagatgaagaagagtaaggatttgagcaataaaaaggaaagg
aagtcggtgaaggaagaaatagcggttcctgctacacgagaggtgaaagtttgtatcagt
gaagatgagaagatagaggagcttgttagagagtactctgcatcaactgatttggtcagc
ttggattggaagaagatgaaaataccacctgttcttccgtcttctgaacatacttggttg
tttaaattgttggagctcagaaaggcccttctgcaagtgaaggagaatctgcagagagaa
ctgggaagagatccaactgatgccgagctaggacaggcgacaaatatgactgtaattcaa
gttagaagaaaaatggaggctggacatgcggcaagaaacaaattgattaagcataaccta
agacttgtattatttgtgatgaacaaatactttcaagactttacaaatggaccaaaattt
caagacctttgccaagcaggagttaagggtcttataatagctattgatcgctttgaaccg
aaaaggaaattacggctgtcaacatatgcacttttctggatacggcatgctatcattcgt
tcaatgactgtctcaagctttacccgtgtcccctttggtctggaatcggtaaggatggaa
atccaaaaagccaaacttgaattgatgtttgagctgaaaaggatgcctacagatgaagaa
gtaaccaatagagtaggaatatctcttgaaagataccacgaagtgatgcgagccgctaac
tctgtggcttccctacactcaaaaaatcgagttacgcaagaagagttcatcgatgggatt
accgatattgacggtgttgggggcgacaagcggaagcaaccagctttgcttagacttgcc
ctcgatgatgtgctcgactcattaaaaccgaaggagagcttagtcatcaggcaaagatat
ggacttgacggaaaaggagacagaacgttgggagaaattgccgggaaccttaatatttcc
agagaaatggtccggaagcacgaaatgaaggctttgatgaagcttaagcatccagctcga
atggattatcttcgtcatcacatacactaa
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