Silene latifolia (white campion): 141606903
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Entry
141606903 CDS
T11116
Name
(RefSeq) autophagy-related protein 13a isoform X1
KO
K08331
autophagy-related protein 13
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
141606903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141606903
03029 Mitochondrial biogenesis [BR:
slaf03029
]
141606903
Membrane trafficking [BR:
slaf04131
]
Autophagy
Autophagosome formation proteins
ULK complex
141606903
Atg1 complex
141606903
Mitochondrial biogenesis [BR:
slaf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
141606903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
141606903
NCBI-ProteinID:
XP_074282366
LinkDB
All DBs
Position
10:complement(165382775..165386870)
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AA seq
630 aa
AA seq
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MDFHVTSSSDYGRFEQIVSQFLLKTLHVILESRIPSLKPLDRSGDLFANSKPKKTDKWFN
LALGDRPQALDKLQFWHRNLMDPMVIDIIVVRRESQDSSAHDFYLGDMFEGASVETLVER
WVVQYESHKTMPVHPGDISSLYKKMYQKSIILFRCLFSMMRHLPAYTIFKQLSTSSQPCD
VDVVYKISSFSDPFSREEEQLMKQYSFNPVEGVNGKLCVSVSYRSNLSEFSLENSTAFPP
LIIADYVGSPATDPMRAFPSMERVPRTSSFSLRGTQNLPSMPNQRPHSWSSGIHMQIHSS
SGSPPVYGGSFSPNDDPSYQTRRQGQRPQNFKMSRGLYKNSTYEESLSPPFSPSSSPSAP
AYHFSHSPSQSRLRPESAPMAIPHPMMNRSPRYLSPNLSDPSRHSLPPFSPRNTRPEPAP
HGSPSPSGNRVSRKLDISRAGDFYSGMANQSIGPKVLRDSQDESGRFSGLYSSGSSPHKG
FSRSSSKLSFQDDLDECDFSCPFDVDDVDTSESQTSQSYDGKKGIDFNSGLSLGRKSQDA
AVGALVHMLRTAPPLRQDSSFYSSHSQTTQQDTNFGTGSAYLMPRKAADALEELKSYREL
KDILLSKSGNQELSQKDSQALPVEIKGRKI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggatttccatgtcacttcctcatcagactatggaagatttgagcagattgtctctcag
tttcttcttaagacactccacgttatactcgagtctaggattccctcacttaaaccccta
gatcgtagtggagatctcttcgccaattcaaagcccaaaaaaactgacaaatggttcaat
ttagcgctaggggaccgtcctcaagctttggacaagctccagttttggcataggaatctc
atggatccaatggttattgatataattgttgtacgtcgagaatcccaggattcctctgcc
catgatttttaccttggcgacatgtttgagggggcatcagttgagacacttgttgagaga
tgggtggttcagtacgaaagtcacaagacgatgcctgttcatcctggcgacatttcttcg
ttatataagaagatgtatcagaaatcaatcattcttttccgatgtctcttctcaatgatg
agacatttgcctgcttatactatattcaagcaacttagtacctcaagtcaaccctgtgat
gttgatgttgtgtataagatttcttctttcagcgatcccttctcacgggaggaggagcaa
ctgatgaagcagtatagttttaacccagtcgagggtgtaaatggtaaactttgtgtttct
gtatcttatagatcaaatttgtcagagtttagtcttgaaaattcaactgcatttcctcct
ttgataattgctgattatgttggtagtcctgccactgatcctatgagggcttttccatct
atggagagggtacctcgtacgtcctcattctcattaagaggaactcaaaatctaccttca
atgcccaaccaacgccctcatagctggtctagtggcatccacatgcaaattcattcttca
agtggatctccacccgtatatggtggttctttttctccaaatgatgatccatcgtatcaa
accagaagacaaggccaaagacctcaaaactttaagatgtctaggggcctttataagaat
agcacttatgaagaatctctttcacctcctttctctccttcttcctctccttccgcacct
gcataccactttagccatagtcctagccagtctcgtctgcggcccgagtctgcccctatg
gctattcctcacccaatgatgaacagaagtcctagatatctttctccgaatttatctgac
cctagtagacattcccttccccccttctctccaaggaatacaagacccgaacctgcacca
catgggtctccatctccatctggaaatagggtttctcgaaagttagacatttcacgggct
ggagacttctattctgggatggcaaaccaatctattggtccaaaggtcttgagagacagc
caagatgaatctggacgattttctgggttgtattcttctggtagctcaccgcataaagga
ttttcaagaagctcaagtaaattatcttttcaagatgatttagatgagtgcgatttctca
tgtcctttcgatgttgacgatgttgatacgtcagaatcccaaactagtcagagttatgat
gggaaaaaagggatcgatttcaattctggactgtcattggggcggaagtcacaggatgcg
gcagtgggtgctctagtacacatgttaaggacggccccaccactgcgtcaagattcaagc
ttttattcatcccactcgcagaccacccaacaagataccaactttggaacaggttctgca
tacttgatgcctcggaaggcagcagacgcgcttgaagagctcaagagttacagggagttg
aaagacattcttctgtctaagtccggaaaccaagagttgagccaaaaggatagtcaagct
ctgcctgtggagattaaaggaaggaagatttag
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