Silene latifolia (white campion): 141607065
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Entry
141607065 CDS
T11116
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00061
Fatty acid biosynthesis
slaf00071
Fatty acid degradation
slaf01100
Metabolic pathways
slaf01212
Fatty acid metabolism
slaf04146
Peroxisome
Module
slaf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
141607065
00071 Fatty acid degradation
141607065
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
141607065
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
slaf01004
]
141607065
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slaf04147
]
141607065
Enzymes [BR:
slaf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
141607065
Lipid biosynthesis proteins [BR:
slaf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
141607065
Exosome [BR:
slaf04147
]
Exosomal proteins
Exosomal proteins of breast milk
141607065
Exosomal proteins of breast cancer cells
141607065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
141607065
NCBI-ProteinID:
XP_074282533
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Position
10:9062218..9068304
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AA seq
660 aa
AA seq
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MAEKKYVVEVENAKQAKNGKPSIGPVYRSIVAKDGFPPLLSGMETCWDIFRISVEKFPEN
RMLGYQDDSDEKTGNYVWMTYEEVYNIVIKVGTSIRNCGINKGGRCGIYSVNCPKWVISM
QACNAHGLHCVPLYDSLGADAVEYIICHAEVSIAFVEEKKVPEVLKTMPRTTKHLRTLVS
FGKVAADQKEAAKEFGLEIYSWDDFLELGSNQHFDLPAKKKDDICTIMYTSGTTSEPKGV
LISNETVVTVVSGINFSLKSINEELRQSDRYLSYLPLAHIFDRVVEELFISIGASIGYWR
GDVKLLSDDIKQLKPTILCTVPRVLDRIYAGLMEKINSSGTVKRTLFNLAYSYKLSNMNS
GYKHEEASPLFDKIVFSKIKEGLGGNLRLILSGGAPLAPTVETYLRVVTCAHVLQGYGLT
ESCAASFIAQPNDMAMIGTVGPPAPNVDVCLESVPEMEYDALGNIPRGEICIRGNTLFSG
YYKREDLTKEVMVDGWFHTGDIGEWQPDGCMKVIDRKKNIFKLSQGEYVSVENLENVYSL
ASEIDSIWVYGDSFQSFLVAVVNPNKQALESWAEANSVDTVNDFSSLCQHPGAKDFILDQ
LNKTAKSNKLKGFELIKAVHLDPVPFDMDRDLITPTFKKKRPQLFKYYKDVINKLYQGRN
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaagaagtatgtggtcgaagtcgagaatgcgaaacaagcaaagaacggtaaa
ccttctattggaccggtttaccggagtattgttgcgaaggatgggttcccacctcttctt
tctgggatggagacttgctgggatattttccggatatcagttgaaaaatttccagagaac
agaatgctaggataccaagatgattcagacgagaaaacaggcaactatgtttggatgaca
tacgaggaagtgtacaacattgttatcaaagtcggaacatcaattcgtaactgtggtatc
aacaaaggaggacgatgtggaatctacagcgttaactgcccgaaatgggtgatcagcatg
caggcatgtaatgctcatggactacattgtgtccctttgtatgattctctaggtgctgat
gcagtagaatacatcatttgtcatgctgaggtatcgattgcattcgtggaagaaaagaag
gttcctgaggttctcaagacaatgccgcgtacaacaaaacacttgagaacactggtgagc
tttggcaaggttgcggccgaccaaaaagaagctgctaaagaattcgggttggaaatctac
tcatgggatgattttttggaactgggaagcaatcaacatttcgatcttccagccaaaaag
aaagacgatatttgtacaataatgtacaccagtggtacaaccagtgagcctaagggagtg
ctgatctccaatgagacggttgtcactgtcgtatcaggcattaatttctcattgaagagc
atcaatgaagagcttaggcaaagtgacagatatctgtcataccttccactagcacatata
tttgatcgagtagtcgaggaattattcatctcaattggtgcttcaatcggatattggcgt
ggggatgtcaagctgttatctgatgacattaaacagctgaaaccaacgatcctttgcact
gttccgcgtgtgttggatagaatctatgcaggtttaatggaaaagatcaattcaagtggt
accgtgaaacgtacattattcaatctcgcctactcctacaaattgagcaacatgaattca
ggatataagcatgaagaagcgtccccacttttcgacaagattgttttcagcaagataaaa
gagggtcttggcggaaacctgcggctaatcctttctggtggagcacctcttgctccaact
gtcgaaacatacctacgcgttgtaacttgtgctcatgttcttcaaggatacggtctcact
gaaagctgtgcagcttcattcattgcgcaacccaacgacatggcaatgataggaacagtt
ggaccacctgcaccaaatgttgatgtgtgcctagaatcggttcctgaaatggagtatgat
gctcttgggaacatacctcgaggagaaatttgcataagaggaaacaccctctttagtggt
tattataaacgcgaagacctcactaaagaagtcatggttgatgggtggttccacactggg
gatattggagaatggcaaccagatgggtgcatgaaagtcatcgatcgcaagaaaaacatc
ttcaaactgtctcagggtgaatatgtttcagttgaaaacttggagaatgtatatagtctt
gcctcggagattgattcgatatgggtgtatggagatagctttcagtccttcttggtggcc
gttgtcaacccgaacaagcaagcccttgaatcctgggccgaagcaaacagtgtcgacact
gttaacgacttcagttcattgtgccagcatcccggggctaaggacttcatccttgaccaa
ctcaacaaaactgctaaatccaacaagttgaaaggtttcgagttgatcaaagcagtacat
ttagacccggtgccatttgacatggatcgagacctcataactccaacttttaaaaagaag
aggccacaattgttcaaatattacaaggatgtcattaacaaactgtaccaaggacggaat
taa
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