Silene latifolia (white campion): 141607467
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Entry
141607467 CDS
T11116
Name
(RefSeq) ABC transporter E family member 2-like isoform X1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slaf03009
]
141607467
Ribosome biogenesis [BR:
slaf03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
141607467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
Fer4_RLI
Fer4
LdpA_Fe-S-bd
AAA_29
AAA
AAA_22
AAA_23
TsaE
AAA_15
Rad17
Fer4_21
Fer4_6
NACHT
nSTAND3
SRP54
Fer4_10
Fer4_9
Fer4_2
AAA_5
Fer4_16
Fer4_4
Fer4_7
ORC-CDC6-like
AAA_19
AAA_7
Fer4_3
CitB_N
Motif
Other DBs
NCBI-GeneID:
141607467
NCBI-ProteinID:
XP_074282918
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All DBs
Position
10:complement(13372314..13376569)
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AA seq
623 aa
AA seq
DB search
MYKNFQGKVFGIRLTSSKMSDRLPRLAIVRSDRCKPKKCGQECKKICPVEKTGKQCIEVT
AAAKLAFISEELCFGCGQCVQKCPFNAIQIINLPKDMDKDTTHRYGPNTFKLHRLPVPRP
GQVLGLVGTNGIGKSTALKVLAGNLKPNLGRFDNPPNWQEILTYFRGSELQNYFTRLLQD
GVKAIIKPQYVDNIPKAVQGNVGEVLDKKNERDVKAEILTDLELNKVLNRNVVDLSGGEL
QRFTIAVVAMQNAEIYMFDEPSSYLDVKQRLKAAKVVRSLLRPNSFVIVVEHDLSVLDYL
SDFICCLYGTPGAYGVVTLPFSVREGINIFLSGFVPTENLRFRDVSLTFKVAETPQENAA
EGQSYARYKYPSMTKTQGGFRLSVSAGEFTDSQIVLMLGENGTGKTTFIRMLAGLLKPDN
VGDSDVEVPSFNVSYKPQKISPKFPHTVRYLLHQKISEFYMQPQFVSDVMKPLQIEQLMD
REVVNLSGGELQRVALTVCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRYILHRQKTAF
VVEHDFIMATYLADRVIVYEGSPSVDCTANSPQSLLTGMNLFLSHLDITFRRDPTNYRPR
INKLESTKDREQKSAGTYYYLDD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaatttccaaggtaaagtgtttggcatccgtctaaccagtagcaagatgtca
gaccgtttgcctcgtctagccattgttcgctcagatcgttgtaagccaaagaagtgcggt
caagagtgcaagaagatctgtcctgtggaaaagacagggaagcaatgtattgaggtcact
gcagcagcaaaacttgccttcatttcagaggagctttgctttgggtgcggtcagtgcgtc
cagaaatgcccttttaatgctatccaaattatcaacttacctaaagatatggataaagat
acaacacatcgatatggtccaaacacattcaagttacataggttacctgttccgaggcca
ggacaagttcttggtttggttggaactaatggtattggaaaatcaactgctcttaaagtg
ctagcggggaacttgaagcctaatctggggcgttttgataaccccccaaactggcaagaa
attttgacctactttcgtggctctgagcttcaaaattatttcacccgcttactgcaagat
ggcgtgaaggcaatcatcaagcctcagtacgtggataatattccaaaggcagtccaggga
aatgtcggagaagtgttagataagaaaaatgagagagatgtgaaggctgaaatattgact
gatcttgaacttaacaaagttttgaatcgtaatgttgtggatctttctggtggagaactg
cagaggtttaccattgctgtggtggctatgcaaaatgctgagatatacatgtttgatgag
ccttcaagttaccttgatgtgaagcaaaggctcaaagctgctaaagtagttagatcgttg
cttaggcctaatagctttgttattgtagtcgagcatgatcttagtgttctggactatctt
tcggatttcatttgctgtttatacggtacaccgggtgcttatggagttgttaccttaccc
ttctctgttagagaaggtatcaatatattcttgtccggatttgtgcccactgaaaacttg
cgcttccgtgatgtatcccttacattcaaggttgcagagacgcctcaggaaaatgctgcg
gaaggccagtcatatgctcgttacaaatacccttctatgacaaaaactcagggtggcttt
aggctatctgtcagtgcaggtgaatttacggattcccagattgtgttgatgctgggtgaa
aatgggacggggaagaccacatttattcgtatgctggctggtctgttaaagcccgacaat
gtgggagactctgatgttgaagtgccgagcttcaatgtttcatacaagccccaaaagatc
agcccaaaatttccacacactgttagatatctgcttcatcagaagataagcgagttttat
atgcagcctcaatttgtgtcggatgtcatgaagcctttgcaaatagagcagttaatggac
cgtgaagttgttaatctatctggtggagagttgcagagagttgcattgactgtgtgtttg
ggaaagccggcagatatctatctgatagatgaaccaagtgcatatctcgactcagagcag
cgtattgtagccgcaaaggtgattaagagatacatactccatcgtcagaagactgccttt
gttgttgaacatgattttatcatggcaacatatctggcagacagagtgattgtttatgaa
gggtcaccgtcagtggattgtacagcaaactcccctcagtcgctgttaaccggaatgaat
cttttcctatctcatctggacatcacatttagaagggatccaactaactatcggccaagg
atcaacaaattggaatccacgaaggatagagagcaaaaatcggctggaacttactattac
ctcgatgattaa
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