Silene latifolia (white campion): 141609284
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Entry
141609284 CDS
T11116
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00040
Pentose and glucuronate interconversions
slaf01100
Metabolic pathways
Module
slaf_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141609284
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
141609284
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
141609284
NCBI-ProteinID:
XP_074284494
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Position
10:complement(144847945..144851701)
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AA seq
389 aa
AA seq
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MTNNNLCIVLSVLLFFFIKQNAAKNVVSFGAKPDGRTDSTQAFQKAWSWACSSSRPMTIT
VPRGKFVVRPTRFTGPCRSRVTISIKGTIVPPPDFRVVAQAGEWIMFYKVNGLTVSGGTF
DGMGKAFWSCRQRNAYCYNGAQQSISIMWCTNVELRGITLINSQRVHISVGNSQNIALKS
LTIRAPSGSPNTDGIHLSRSTGITIYNCVIKTGDDCISIGDGTRNTWIQRIHCGPGHGIS
IGSLGNYAQEDGVRNITVTNVVFFKTQNGVRIKTWERPSTGFVRSVTFRNLVMKDVYNPI
IIDQKYCPNFQCPRNNKNSGVRINNVKYRNIKGTSASKVALSFVCSPSNPCQGLKVQDIN
LTFKQTPASVYCSNAHGTHQGTVIPRSCF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgactaacaataacctttgtatagttctttcagttttgttgttctttttcataaaacaa
aatgcagctaaaaatgtagtgtcctttggtgcaaaaccggacgggcgaaccgactcaacc
caggcctttcagaaggcctggtcatgggcttgcagttcgtcaaggcccatgacaattaca
gtcccacgagggaagttcgtggttcgtcccactcgttttactggtccatgtaggagtcga
gtcacgatatctattaagggtacgattgtgcccccacccgactttcgggtggtggcccag
gcgggtgaatggataatgttttataaggtaaatgggcttactgtaagtggtggtacattt
gatggcatgggtaaagcattttggtcttgccggcaacgtaatgcatactgttacaatgga
gcacaacagtcaatatcaatcatgtggtgcaccaacgtagaattgagggggataacacta
attaatagccagagggtgcacatctctgttggcaacagccaaaacattgcccttaagtct
ctaacgataagggcacccagtggaagtcccaacactgatggcattcacctttcgcgctca
accggtatcacgatatacaattgcgttataaaaaccggcgatgactgcatttccattgga
gatggcacccggaatacctggattcaacgtattcattgcggccccggccatggtatcagc
attggtagtttaggaaactatgcacaagaagacggagtaagaaacataacagtgacgaat
gtagtattcttcaagacgcaaaatggggttcgaatcaagacatgggaaagaccaagcacc
ggtttcgtacgtagtgttacatttcgcaatttggtcatgaaggatgtctataatcctatc
attattgatcaaaaatattgtcctaatttccaatgccctcgcaataataagaattcaggg
gtgaggataaataatgtgaagtacagaaatataaaaggaacatcagcatcaaaagtggca
ttatcatttgtgtgtagtccaagtaatccatgtcaaggtttgaaagtacaagatattaat
ttgacttttaagcaaactcctgcatcagtttattgcagcaacgcccatggtactcatcaa
ggcactgttattcctcgaagttgtttttaa
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