KEGG   Silene latifolia (white campion): 141610026
Entry
141610026         CDS       T11116                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    141610026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slaf03021]
    141610026
Enzymes [BR:slaf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     141610026
Transcription machinery [BR:slaf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     141610026
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3
Other DBs
NCBI-GeneID: 141610026
NCBI-ProteinID: XP_074284698
LinkDB
Position
1:143645645..143671351
AA seq 2083 aa
MILETEESATSSAADGEIVGIQFGLASHHEIRTSSISDCPISHASQLANPFLGLPLETGK
CESCGTAEPGKCEGHFGYIELPIPVYHPSHISELKRMLSLICLKCLKMKTSKVPSKNNGV
MERLLSACCEEASHVSIKEVKSTDGASFLELKIPGRARVHDAAWSFLGRFGYKYGDGSSR
TLLASEVLAMLKKLREETKRKLAKKGYFAQDGYILTYLPVPPNCLSVPDVSDGVSVMSSD
LCSSMLKKVLRQIDIIRSSRSGEPNFEAHEVEANDLQIAVSHYLDVRGTSKAARDGDKRF
GVSKEASSSSTKAWLEKMRTLFISKGSGFSSRSVITGDAFRPVNEVGIPSEIAQKMTFEE
RVNVHNIQYLQRLVDNNLCLTFRDGSATYSLKEGSKGHTFLRIGQVVHRRIMDGDVVFIN
RPPTTHKHSLQALRVYIHDDHVVKINPLMCGPLAADFDGDCVHLFYPQSLSARAEVLELF
SVDKQLLSSHSGNLNLQLATDALLSLKMIFSMYFMDKASAQQLVMHSSTSLPSPAVRKAC
SAGPRWSAQQILQTALPPQFECQGERLLIRGSEILKLDFNRDIIASVISDILTSLFFSKS
PKQALNFFDSLQPLLMENIFSEGFSVSLSDFFVPFSELEGIQTQIQDMISPLLFQLRSSF
NELIQLQFESYMKLLKVPISNFILKFSALGNLIDSRSESAIDKIVQQIGFLGLQLSDKRK
FYSKSLVEEVGSLFKSKHPFACLYPSEECGLVRSCFFRGLDPYQEMVHSIATREVIVRSS
KGLAEPGTLFKNLMAVLRDVVICYDGSVRNVSSNSVIQFEYGLEGVTSQSLFPAGEPVGV
LAATAMSNPAYKAVLDSSPSSNSSWDLMKEILFCRANFRNDFNDRRVILYLNDCTCGRKY
CQENASFVVKNHLKKVSLRDAAVEFLIEYKRPKAEPGSTDIESGLVGHIHLNATLLRESK
ISTHDILQKCEEQVNVLRRKKKYGQCFKRMSLSVSECCQFPTSGGRWTDMPCLKFFWEDM
ADPHIEKISHIMADLICPVLLDTVIKGDPRISTVNIVWINPGTTSWVQSPCERKGELGVE
VTLEKTAVRQSGDAWRIVLDCCLPIFHLVDTRRSIPYAIKQIQDLLGISCGFDQAVQRLS
TSVTLVTRGVLKEHLILLASSMTCSGNLVGFNISGIKALCRALSAQVPFTEATLYTPRKC
FERASEKRHVDSLAGIVASCSWGKRVAVGTGTKFEILWDTKEIEMDKEPIDVYNFLHLVR
SSNEEGMETGCLGEDIDEFDWEDSHMEPALSPDQENKAVFEEIIELDMHSQEQGGGSSES
GWNVGSKSAEGNGWANWGPKKDPPQPEDRSGSASWDVPKNQDSAKGDGSASWGTKKDQSR
PEDSSTTAGWGASKTQDSEEGEKNQAWGNTHNSVQEKAMWGQPQPEDRSGSASWDVPKSQ
DSAKGNDSVNWGTKKDQSRPEDSSKTAGWGASKTQDSEKEGEKNQAWGNTRNSVQEKATW
GPPSTASWKQNKNDGDDNQLAGSLSLESESGRKIESSWGPVKEGSSLKETTPASSDDWRS
KKSVRTSSDDWGSKKSVGTSSNGWNSQQTKSSWNSGRNDGGEKSSLETPSVVPWSKNNSQ
GGGGWASTQANQHVETGAGWGASKTQNSENEGEKDQAWGNSRNSVQEKAMWGPPSAASWK
QNKNNGDDKQLAGSLSLESESGRKIESSWGPLKEGPSLKETTPVSSDDWGSKKSVGKSSD
EWGSKKSVGTSSDDWGSKKSVGTSSNGWNSQETKSSWNSGRNDGGEKSSLETPSGSPWSK
NNSQGGGGGWASTQANQQGETGGWGSEKKGSNTQFSWKHNHEEPQSQSGRSFGRGSGRGD
NGGGRGWGSNNSGEWKSRKNRLPKQPGSNDDFSNVALTATKRRMDLFPAEEQDALSEIEK
IMLAIRRIMHQSGCNDGDPLPSDDQSYIINNVLEYHPDKAAKMGAGIDFITVKKHSNFQE
SRCFFVVSTDGQSEDFSYIKCLENFIKGKHPSVAESFNSKYFRKPQAGGNRQPGQRTQNA
SDSPNFTQSSPESPNFTQNSPESPNFTQNVPESPKLTQNASEH
NT seq 6252 nt   +upstreamnt  +downstreamnt
atgattttggagacggaagaaagtgcgacttcatcggctgctgatggagagatagtcgga
attcagtttggcttggcaagccatcatgaaattcgtacatcgtcaatcagtgattgccca
attagccatgctagtcagctggcaaatcctttccttggcctgccgttggaaaccgggaaa
tgtgaatcttgtggtaccgcagaaccgggaaagtgtgaagggcactttggatacattgag
ttacccataccagtttatcatccatctcacatcagtgaattgaagcggatgcttagtttg
atttgtcttaaatgtttaaagatgaagactagtaaggtaccgtcgaagaacaatggcgtt
atggagagattgctgtcagcatgctgtgaagaagcttctcatgtctccatcaaggaggtg
aagagcactgatggggcatcattccttgagctaaaaataccaggcagggcgagagtacat
gatgctgcttggagctttctcggaagatttggctacaaatatggggatggttcttctaga
accttgctggcttccgaggtattagcgatgctgaagaaactacgcgaggagacgaaaaga
aagcttgcgaagaaaggatactttgctcaagatggttatattttaacttatttaccagtg
ccacctaactgtttatctgttccagatgtgtcagacggagttagtgtaatgtcctcggat
ctttgttcatctatgctgaaaaaggtgctcaggcaaattgatatcattaggagttcgcgg
tccggcgaaccaaattttgaagcacatgaagttgaagccaatgaccttcagatagccgtt
tcacattatcttgatgtgagagggaccagcaaggctgcacgtgatggggacaaacgattt
ggagtaagcaaagaagcaagtagttcatctacaaaagcttggctcgaaaaaatgagaaca
ctttttattagcaaggggtctggtttctcttcacgttccgtgattactggcgatgctttt
agaccagtgaatgaagttggtattccatctgaaatagcacagaagatgacatttgaggag
agagtgaatgttcacaatatacagtatttgcaacgtctcgtggataataatttgtgcctt
acttttagggatggatcggcaacgtattccctgaaagaggggtcaaaggggcataccttt
cttaggattggacaagttgttcataggaggattatggatggggacgttgtcttcatcaac
cgacctcctaccactcataagcattctttgcaagctttgcgtgtttatattcatgatgac
catgtagttaaaattaatccgctgatgtgtggtccacttgctgcggattttgatggtgat
tgtgttcacctgttctatcctcagtcactgtctgctagagctgaagttctagagcttttc
tcggtagataaacaattgttaagctcgcacagtggcaacctcaatttacagcttgcaact
gacgcattgttatcattgaagatgatttttagtatgtattttatggacaaagcatcggcc
caacagttggttatgcattcatcaacctctttgccatctccggcagttcgtaaagcgtgt
tctgctggtcctcgttggtctgctcagcaaatcttgcagactgctttacctccacaattc
gagtgccagggtgagagattgttgattagaggaagtgaaatattgaagttagatttcaat
cgggatattattgcttccgtcatcagtgacattctgacatcattgttttttagcaaaagc
ccgaagcaggctcttaacttcttcgattctctgcagcctcttctcatggaaaacatattt
tctgagggttttagtgttagtttgagtgattttttcgtacccttttctgaactggaaggc
attcagacccagatccaggacatgatttctcctctattatttcagctaagatcatctttt
aatgaactaatacagctgcaatttgaaagttatatgaaacttctcaaagtacccatatcg
aacttcattctgaaattttcagcacttggaaatctaattgattcgaggagcgagtctgct
attgataagattgtacagcagattggttttttggggctccagctgtcagataagcggaag
ttttattcaaagagtttagtggaggaagtggggtctctttttaaatcgaagcatcccttt
gcttgtttgtacccttctgaggaatgtgggctggtgaggagttgttttttccgcgggttg
gatccatatcaagagatggttcactcgattgcaaccagagaggtgattgttcgctcgtca
aaagggcttgctgaacctgggacactcttcaagaatctgatggcagtattgagagatgtt
gttatatgctatgatgggtctgtcagaaatgtcagtagtaattcagttattcagtttgaa
tacgggcttgagggggtgacatcacaaagtctttttccagctggggagcccgttggtgtc
ttggccgccactgccatgtctaatcctgcatataaggctgttctcgattcttctcctagt
agcaattcatcttgggatttgatgaaggaaatactgttctgccgagccaatttcagaaat
gacttcaatgatcggcgtgttatcttgtatttgaatgattgtacttgtggaaggaagtac
tgtcaagaaaatgcatcctttgtggtcaagaatcacctgaaaaaagttagcctaagagat
gctgccgttgaatttttaatcgagtacaaacgaccaaaggctgaacctggaagcacagat
atagaatcaggactcgttggtcacattcatcttaatgcgactttactgagggagtcaaag
atcagtacgcacgacatactacagaaatgtgaggagcaagtgaatgtcttacgaaggaag
aagaagtatggtcagtgctttaaaaggatgtctctgtctgtcagtgagtgttgccaattc
ccaacttcaggaggtaggtggactgatatgccatgcttgaagttcttctgggaagacatg
gctgacccacacattgagaaaatatcacacatcatggctgatttgatctgccctgttctg
ttagacacagtcattaaaggtgatcctcgaatatctactgtcaacattgtctggattaat
cctggcacaactagttgggtgcaaagtccttgtgaaagaaagggtgaacttggcgtggaa
gttactctagagaagacggcagtccggcagagtggtgatgcatggaggattgttcttgat
tgctgtcttcctattttccatttggttgatacaaggcgttccatcccatatgctattaaa
caaatccaagacctacttggaatttcttgtggctttgatcaggcagtgcagcgcctttca
acatcagtgactttggtcacgagaggtgttcttaaagagcatttgatcctcctggctagc
agcatgacttgttctggaaacttggttggtttcaatataagcggaatcaaggcattgtgt
cgtgcactaagtgcccaagtgccattcaccgaggcaactctctatacaccccggaagtgt
ttcgagagggcttctgaaaaacgtcatgtggattccctagcgggcattgttgcatcttgc
tcatggggaaagcgtgttgctgttggtacaggaaccaagtttgaaatcctgtgggacacc
aaggagattgaaatggacaaggagccgattgatgtttacaattttctacatttggttcga
agctccaatgaggaagggatggagactggctgtttgggtgaagatattgacgagtttgac
tgggaagatagtcatatggagcctgctctatcacctgatcaagagaataaagctgttttt
gaggaaatcattgaacttgatatgcattctcaagaacaaggaggtggcagttcggagagt
gggtggaatgtgggctctaagtcagcagagggtaatggttgggccaattggggacccaag
aaagatccaccacagcctgaagatagatctgggtctgccagttgggatgtaccaaagaac
caggactcggcaaagggtgatggctcggccagttgggggaccaagaaagaccagtcacgg
ccagaagactcatctactactgctggttggggtgcatcaaagacccaagattccgaggaa
ggagagaaaaaccaggcttggggtaacactcataattctgttcaggaaaaggctatgtgg
ggtcaaccacagcctgaagatagatctgggtctgccagttgggatgtaccgaagagccag
gactcggcaaagggtaatgactcggtgaattgggggaccaagaaagaccagtcacggcca
gaagactcatctaagactgctggttggggtgcatcaaagacccaagattctgagaaggaa
ggagagaaaaaccaggcttggggtaacactcgtaattctgttcaggaaaaggctacgtgg
ggtccacctagcactgcctcctggaagcagaataaaaatgatggcgatgataatcaactt
gcaggttccttaagtctagaatctgaaagtggaagaaagattgagtcttcatggggaccg
gtgaaagaaggctcgtctttgaaagaaacaactcctgcaagttctgatgattggaggtca
aagaaatctgtcagaacaagttctgatgattggggttcaaagaaatctgttggaacaagt
tctaatggatggaactctcaacagacaaaatcgtcttggaattcaggtcgtaatgatggc
ggggagaagtcttcattggaaactccaagtgtggttccatggagtaaaaacaacagccaa
ggtggtggtggctgggcatctacccaggccaatcaacacgtagaaactggagctggttgg
ggtgcatcaaagacccaaaattccgagaacgaaggagaaaaagaccaggcctggggtaat
agtcgtaattctgttcaggaaaaggccatgtggggtccgcctagcgctgcctcctggaag
cagaataaaaataatggtgatgataagcaacttgcaggttccttaagtctagaatctgaa
agtggaagaaagattgaatcttcatggggaccgttgaaagaaggcccgtctttgaaagaa
acaactcccgtaagttctgatgattgggggtcaaagaaatctgttggaaaaagttctgat
gagtggggttcaaagaaatctgttggaacaagttcagatgattggggttcaaagaaatct
gttggaacaagttctaatggatggaactctcaagagacaaaatcgtcttggaattcgggt
cgtaatgatggcggagagaagtcttcattggaaactccaagtggatctccatggagtaaa
aacaacagtcaaggtggtggtggtggctgggcatctacacaggccaatcaacaaggagaa
actggaggctgggggtcggaaaagaaagggagcaacacacaattttcttggaaacataat
cacgaggagccgcaaagtcaatctggccggtcgtttgggcggggttccggaaggggtgac
aatggtgggggccgtggttggggttctaacaattccggagaatggaaaagccggaagaat
cgccttccaaaacaacctggatcaaatgatgacttcagtaatgtggcattgacagctacc
aagaggcggatggatctgtttccggctgaggaacaagatgccctttctgagatcgaaaaa
atcatgctggctatcagacgaatcatgcatcagtcagggtgcaatgatggagatccgctt
ccttctgatgatcaatcatatatcatcaacaatgtcttggagtatcatcctgataaagca
gcaaaaatgggagctggaatcgattttatcacggtgaaaaagcacagcaacttccaggaa
agccgctgcttctttgtggtatcaactgatggtcagtcagaggacttttcctacattaaa
tgcttggagaatttcattaaggggaaacacccttccgttgctgaatcattcaattccaag
tatttcagaaagcctcaggcaggtgggaaccgtcaaccagggcaacgaacgcaaaatgca
tccgactcccctaatttcacacaaagctcacctgaatctccaaatttcacccaaaattca
ccagagtcgccaaattttacgcaaaatgtacccgagtctccaaagctcacacaaaatgca
tctgaacactga

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