Silene latifolia (white campion): 141610530
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Entry
141610530 CDS
T11116
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141610530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141610530
Spliceosome [BR:
slaf03041
]
Common components
Common spliceosomal components
SR proteins
141610530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
YflT
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
141610530
NCBI-ProteinID:
XP_074284728
LinkDB
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Position
11:complement(177961..182085)
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AA seq
250 aa
AA seq
DB search
MSHIGRAGPPDITDTYSLLVLNISFRTTVDDLFPLFDKYGKVVDIHIPRDRRTGESRGFA
FVRYKYGDEAQKAVDRLDGRQVDGREIAVQFAKYGPNAERIHKGRILEPIAKVRSPRPRS
RDDYRDRDYHRRSRSRSADRYDRDRYREKDRSYRRRSRSRSYSPGYSRGRGRDRYDDEKN
YGSRSPKSASPPRRSRSSRRSPSPRLISPRRPSVSRSRSPDRHSPKAPSVSPRRSVSPRV
SRSPSPRKSD
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacatcggaagagctggtcctcccgacatcaccgacacttactctctcctcgtc
ctcaacatcagctttcgaacaactgtagatgatttatttccgttgttcgacaaatacggc
aaagttgtcgacattcatatccctagagatcgaaggactggtgaatctcgtggtttcgca
tttgtgcggtacaagtatggagatgaggcacagaaggctgttgataggcttgatgggagg
caggtggatggtagagaaattgcggtccagtttgcaaaatatggaccaaatgctgagaga
atccacaagggaaggatcctggagcctattgccaaggttagaagcccaaggccaaggtcc
cgtgatgactacagggacagggactaccacagaagaagccgcagtagaagtgctgacagg
tacgatcgtgatagatacagggaaaaagacagaagttaccgccgtcgcagcaggagtcgt
agctacagtcctggctattcaagaggtcgtggccgagatcgttatgatgatgagaagaac
tatggaagcagatctcctaaaagtgcctctcctccaagacgaagtcggagttcacgtaga
agtccttctccccgcctaatctcacctcgcaggccatctgtttctaggagtcgttctcca
gataggcacagtcctaaagcaccctctgtttctcctcgtcgttctgtctcccctcgtgtt
tcgcgcagcccctctcctcgcaagtcagattag
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