Silene latifolia (white campion): 141610556
Help
Entry
141610556 CDS
T11116
Name
(RefSeq) putative indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
141610556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
141610556
NCBI-ProteinID:
XP_074284792
LinkDB
All DBs
Position
11:complement(537291..548044)
Genome browser
AA seq
597 aa
AA seq
DB search
MSFMAVGKDDHAHAYDESVNFINEVTSKCDEIQGKVLAEILSQNAETEYLKRHGMVHGGV
DRETFKTRVPIVTYKDIKPDIMRIYNGDYTPILCAQPFSELWISTGTSDAQEKLLPATDQ
EKVRRDNLSTTIMPFIKRRIEGPEANKGKGFSLLITREETVTPNGLLLCTGLTSVFKNPR
FYRDNPYPNNYNTSPMEAIYCTDHFQSVYTQLLCGFYQRHDVSHAKAVFGSSIIWAVHFL
KQHYLDICHDIESGSLSTKITDPSLRVCMIKTFMQHPDPMLANVIRAACMGENWEGIFRK
IWPNIKYVETIVTGSMAQYIPMLNYYSGGLPLVCVKYSASECDLGFNLNPMCDPYNVSYT
IMPNMAYYEFIPLELLSDYGSSELPPRTVDMANVEVGKEYELVVTNYCGLYRYKVGDVLS
PTGFYNSTPQFKFMRRKNVLLSMDLAKTTEIELQTAIDKVSSLLHPFNTQIIDYTSCAEM
KTTPGHYVIYLELMTTTSAGLNGLLTPEILEQCCSAMEGYLGVYYRWCRGDGSIGPLEIR
VVKNGTFEKVRDYAISELGSSFIQFKIPRCVKSVHMLDVLNFGVVSTHFSPSVPRTD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcatggcggtgggcaaagatgatcatgctcatgcctatgacgagtcggtaaat
ttcattaatgaagtgactagtaagtgtgatgaaatacaaggtaaagttttggccgagatc
ttaagccaaaacgcagagacggagtacttgaaacgacatggcatggtgcatgggggagtt
gatcgggagacgtttaaaacccgtgtgccaattgttacgtataaggatataaagcccgat
attatgcgtatatataatggggattatactccgattttatgtgctcaacctttttccgag
ttatggattagcacggggacatcagatgctcaagagaagctattacccgcaactgatcaa
gagaaggtgagacgggataatttgtccaccactatcatgccttttatcaaacgacgtatt
gaaggaccagaagcaaacaaagggaagggattcagcttgctaataacccgagaagaaacg
gtaacaccaaacgggttactactatgtacgggtctaacaagtgtattcaagaaccctaga
ttttatagggacaatccttaccctaacaactataacactagtccaatggaggccatatat
tgtacggaccactttcaatcggtttacactcaattactatgcgggttttaccaacgccat
gacgtgtctcatgcaaaagccgtttttgggtctagcatcatttgggctgttcatttcctt
aagcaacattatttggacatttgccatgatattgagtccggtagcttaagcacaaagatt
acagacccgtctctacgggtctgtatgattaagacctttatgcagcacccggacccaatg
ctggcaaatgttattagggctgcttgtatgggagagaattgggaagggatttttcgtaag
atttggcctaatattaagtacgtcgagactattgtcacgggttctatggcacaatatata
ccgatgttgaattattatagtggagggttacccttggtctgtgttaagtattcggcctcg
gaatgtgatttgggttttaacttgaatccgatgtgtgatccgtataacgtctcttatact
ataatgcctaacatggcttattatgagtttatacctcttgaattattgtcggattatgga
tcttctgaattaccgcctcggacggttgatatggcaaatgtagaggtgggcaaagagtat
gagcttgtagtcaccaactactgtggtctatatagatacaaagttggagatgtgctatcc
ccaacaggattctacaattcaacaccacaattcaagttcatgaggagaaaaaatgtgtta
ctaagcatggatttggctaaaacaacggaaatcgaattacaaaccgcgatagataaggtt
tcatcgttgcttcacccatttaacacccaaataatcgactacacgagttgtgcggaaatg
aagaccactcctggccactatgtcatctacttggaactcatgacgactacgtccgccggc
ttaaatgggttattgacacccgagattttggaacaatgttgctcggctatggaaggctac
ctaggtgtttactataggtggtgtcgaggcgatgggtcaattggtccgcttgagatccga
gtcgttaaaaacgggacattcgaaaaggttagggattatgcaatctctgaattagggtcg
tcttttattcaatttaagattccgaggtgcgtgaaatcggtccatatgttggacgtgctc
aattttggagtcgtctcaacacactttagcccttcggtacctcgaacggattag
DBGET
integrated database retrieval system
