Silene latifolia (white campion): 141610731
Help
Entry
141610731 CDS
T11116
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
slaf01003
]
141610731
Enzymes [BR:
slaf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
141610731
Glycosyltransferases [BR:
slaf01003
]
Polysaccharide
Structural polysaccharide
141610731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
141610731
NCBI-ProteinID:
XP_074285080
LinkDB
All DBs
Position
1:154006830..154010634
Genome browser
AA seq
534 aa
AA seq
DB search
MCKINSTSSSEIMRERRVIGEGGKESMWKMKMKLKTILSDSTKVEKWRATIIRSNRLKLM
LRAIPTLLLWLVVIHSFRIGQVWRPHLFMGWPSCFNINNNHPPLLDSRLNLQLPITQPKL
IRPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARHLNVTLVVPELDKTSFWNDPSEF
QDIFDVDHFITSLRDEVRILKELPLKLKLRSEFQPVYSLPPVSWSDLSYYQNQILPLLVK
NKVVHLNKTDTRLANNGLPLDIQKLRCKVNYDALKFTPQIEELGKRVVKILRENGPFLVL
HLRYEMDMLSFSGCTQGCNKDEADELTRMRYSYPWWKEKIIDSDAKRRDGLCPLTPEETA
LTLQALGIDQNIQIYIASGEIYGGKKRMISLASSFPNLVRKETLLEPSDLNFFRNHSSQM
AALDYLVSLESDIFVPTYDGNMAKVVEGHRRFMGFKKTITLDRKLLVQLIDKYTNESLSW
DEFSASVKEIHANRLGSPHPRTMIPDKPKEEDYFYANPYECLEQPPDNKALQIE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaaataaattcaacatcttcaagtgaaataatgagggaaagaagagtaatagga
gaaggaggaaaagaaagtatgtggaaaatgaagatgaaattgaagacaatattgagtgat
tctacaaaagttgagaaatggagagcaacaattattagatcaaatagacttaaattaatg
ttaagagcaattcctacccttttattatggttagttgtgatacattctttcagaattggt
caagtttggaggcctcatttgttcatgggttggccttcttgtttcaatattaataataat
catcctcctttgctcgactctcgtctcaatcttcaattgcctattactcaacctaaactt
attcgtcctcctaagagggtttataagaacaatggttacctcatggtatcatgcaatggt
ggccttaatcaaatgcgggcagcgatatgtgatatggtggcaatagcaagacatttaaat
gtcactctcgttgtcccggaattggataaaacatcattctggaatgaccctagtgaattc
caagatattttcgatgttgaccatttcatcacatcattgagagatgaagttcggatactg
aaagagttacctctaaagttaaagctaaggagtgaatttcagccggtgtattctttgccg
cctgttagttggtctgacctttcttattaccaaaatcagattcttccattgcttgtaaag
aataaggttgtacatctgaataaaaccgatacgcgacttgcaaataatgggttgcctctt
gatattcaaaagttacggtgcaaggtaaattatgatgcattgaagttcactccccaaatt
gaagaattgggcaaaagggtggttaagattcttagggagaatggtcccttcttagtgctt
catctaagatatgaaatggacatgttatctttctctggctgcactcaaggttgtaataaa
gatgaggctgatgaactgacaagaatgaggtattcctatccatggtggaaggaaaaaatc
atagactcggatgcaaaaagaagagacggtctgtgcccattgacccctgaggaaactgcc
ttaactctacaggcactggggattgatcaaaatattcaaatttatatagcgtcaggggag
atatatggagggaaaaagagaatgatcagcttagcatcatctttccctaatttggtcaga
aaggaaacactgcttgaaccctctgacttgaacttttttcggaatcactcgtctcaaatg
gctgcattggactacttggtttccttggagagtgatatctttgttcctacatatgacgga
aacatggctaaagtcgttgaaggccatcggagattcatgggtttcaagaagacgatcaca
cttgacaggaagcttttggttcagttaatagacaaatacacaaatgaatcattaagttgg
gatgagttctctgcatccgtgaaggaaattcatgctaatcgtttgggaagtccccatcca
cgaacaatgattcccgacaaacccaaagaagaagactatttctatgccaacccgtatgag
tgcctggaacaaccaccggataataaagcattacaaattgaatga
DBGET
integrated database retrieval system
