Silene latifolia (white campion): 141610784
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Entry
141610784 CDS
T11116
Name
(RefSeq) DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
slaf03029
]
141610784
Enzymes [BR:
slaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
141610784
Mitochondrial biogenesis [BR:
slaf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
141610784
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
GYF_2
Motif
Other DBs
NCBI-GeneID:
141610784
NCBI-ProteinID:
XP_074285149
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All DBs
Position
1:155238391..155247379
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AA seq
1023 aa
AA seq
DB search
MSCISIPFLAPAIISHNLNPNFQIHSSTYKLSFNPLHHNSSTMWRNLAKQAIFRSHMASF
RRYGFIGVSHDLIFSNCKNLNFHEMGFCRKAGSLLKEVIGEKPILGCLSNQPNLNLNLNL
NRLCPKGYSSIAEVELNSSEDYGEDDCSVVNEIQELVEEMRREEKRAKWREVKQKQPKSV
AGMGPYKYQALRNRQIKHETEAWQQAADEYRELLADMCKHSLAPNLPYVKSLFLGWFEPL
RNSIMEDQELIREGKSRAAYGPYFDLLPADMMAIITMHKLMGMLMTGSAYGNVKVVHAAC
AIGEAIEQEVRIHLFLEKKKKKKQGDPVVNADVLLRQQLLRNNVDSLIKKQKRRQALKIV
TSNDEMNPWGTEARAKVGSRLIELLIKTAFIQPPASQSAEDFPNIRPAFVHSLKNVGPDN
KKTSRRYGVIECDPEVIKGLEKTPKHMVIPYMPMVVPPEKWRGYDKGAYLVLRSFVMRTH
GSKHQREAVKRAPEKQLELVYEALNTLGNTKWRVNTKVLSIVDRIWATGGRLADLVDRDD
VPLPEQPETEDESELKKWKWKVRSVKKENRERHSQRCDVELKLEVARKMKDEEGFFYPHN
VDFRGRAYPMHPYLNHLGSDMCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSLE
GRLSFTDNHLDDVLDSANKPLEGRRWWLKAEDPFQCLAVCIDLAGALRSPSPEAYISHIP
VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAERVLAIMKHDAENDPEDF
PDALHARRLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGIFNDDVELFGAACY
AAKTTLTALGEMFQGARGIMCWLGDCAKLIATENHPVRWTTPMGLPVVQPYYKKGRRLIR
TSLQMLTLERESEKIMIKRQKTAFPPNFVHSLDGSHMMMTALACKNAGLSFAGVHDSYWT
HACDIQQMNKILREKFVELYEEPILENLLNSFQQSFPYLQFPPLPERGDFDLKEVLDSTY
FFN
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtattagtatcccctttttagcacctgcaattatttcccacaatttaaaccct
aatttccaaattcattcatcaacttacaaactttcattcaacccacttcatcataattca
tcaactatgtggagaaatttggctaaacaagctattttcaggtctcatatggcctctttt
cgacgttacggttttataggggtatctcatgatttgatatttagtaattgcaaaaatctc
aactttcatgagatgggtttttgtagaaaggctggttctttgttgaaggaagtgattggg
gagaaacccattttagggtgtttgagtaatcaacctaatttgaatttgaatttgaatttg
aataggttgtgccctaaagggtattctagtattgctgaggttgaattgaactcttctgaa
gattacggcgaagatgattgttcagtggtaaatgagattcaggaattggtggaggagatg
aggagggaggagaagagggcgaaatggcgtgaggttaaacaaaagcagcctaaatcagtg
gcaggaatgggaccctataagtatcaggcccttagaaataggcagattaaacatgagacc
gaggcgtggcaacaagctgcagatgagtacagggaactgttagctgatatgtgtaagcat
agcttggcacctaatttgccatatgtcaagtcattgtttcttggatggtttgagcctctc
agaaatagcattatggaggatcaagaattaatcagggaaggcaagtcgagagccgcttat
gggccctattttgatctgttgcccgctgacatgatggctattataactatgcataagttg
atgggaatgttgatgactggaagtgcatatggaaatgttaaggttgtgcacgccgcttgt
gccattggcgaagctattgaacaagaagtgagaatacacctattcttagagaaaaaaaag
aagaagaaacaaggtgatccggttgtaaatgctgatgtgcttttaaggcaacaactgttg
agaaacaatgtagatagcttgattaagaagcaaaagcgacgacaagctctaaagatagtt
acttctaacgatgagatgaatccttggggtacagaagcaagggctaaggttgggagcagg
ttgattgagttgctgatcaaaaccgcctttatacaacctcctgctagtcaatcagctgaa
gatttccctaatattcgacctgcatttgtgcattcattgaaaaatgttggtcctgacaac
aagaaaaccagcaggagatatggagtaatagaatgtgaccctgaagtaatcaaaggttta
gagaaaactcctaagcacatggtaatcccgtatatgccaatggtggtgccaccagaaaag
tggagaggttatgacaaaggtgcatacttggttttgcgatcatttgtcatgcgaactcat
ggatctaaacaccaacgtgaagcagtcaaaagagcccctgaaaagcagctggaattggtt
tatgaggcattgaatactcttggaaacacaaaatggagggtaaatacaaaggttctcagc
atagtggataggatatgggctactggaggacgtttagctgacttggttgatcgtgatgat
gtacctctgccagaacaaccagagacagaagacgaatctgagcttaagaaatggaagtgg
aaggtcagatcagtgaagaaagagaatcgagaacgacattctcagcggtgtgatgtagaa
ctcaaacttgaggttgctcgaaaaatgaaggatgaagaaggcttcttttaccctcataat
gttgactttcgtggtcgtgcataccctatgcatccttacttgaatcacctgggctctgat
atgtgtcgaggtgtgctagaatttgctgaggggcgccctcttggaaaatcaggattgcgt
tggctaaaaattcacttggcgaatttatatgctggcggtgttgacaaattgtctcttgag
ggacgattgtcatttactgataatcatttggatgatgtacttgactccgcgaataagcca
ctagaaggaaggcgttggtggttaaaagctgaagatccttttcagtgtttggccgtctgc
atcgatctggctggagcgttgagaagtccgtcacctgaagcatatatttctcatattcca
gttcatcaggatggttcctgcaatggtttacaacactatgctgctctcgggagagataag
ctgggagctgctgctgtgaatcttgttgcgggtgaaaaacctgcagatgtttactcaggg
attgctgaaagggttctagctatcatgaaacatgatgcagaaaacgatcctgaagatttt
cccgatgcattacatgctaggcgattggtcaatcaggtcgataggaaattggtcaaacag
acagtcatgacatcagtatatggtgtcacttacattggtgcaagagatcagatcaagagg
aggttgaaggagcgcggcatattcaatgacgatgtggagctttttggtgcagcttgttat
gctgcaaagacaacattgacggcattaggagagatgtttcagggtgcccgtggtattatg
tgctggcttggtgactgcgctaagctaatagcaaccgaaaatcatcccgtgaggtggaca
acacctatgggtcttcctgttgtgcaaccttactacaagaaaggcaggcgtcttataaga
acatcccttcaaatgttgactttagaaagagaatccgaaaagatcatgattaagcggcaa
aaaacagctttcccgccaaattttgtgcactcccttgatggttcgcatatgatgatgact
gcacttgcctgcaaaaatgcaggcttaagtttcgcaggagttcatgattcatattggaca
catgcatgcgacatacagcaaatgaacaagatacttcgtgagaaattcgtagaactttat
gaggaaccaattctggaaaatttgctgaatagtttccagcagtctttcccctatttacaa
ttccctccgctgcctgaacgaggagacttcgatctaaaagaagttctggactccacatat
ttcttcaactga
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