Silene latifolia (white campion): 141610928
Help
Entry
141610928 CDS
T11116
Name
(RefSeq) tRNase Z TRZ3, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaf03016
]
141610928
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
141610928
Transfer RNA biogenesis [BR:
slaf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
141610928
Prokaryotic type
141610928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
141610928
NCBI-ProteinID:
XP_074285342
LinkDB
All DBs
Position
11:8623163..8630055
Genome browser
AA seq
935 aa
AA seq
DB search
MSQITSLRLLINNSPPKFTPFFSKPIKHFYLSTVFSSLSKPNRKNLHSAAAKPFINTKNN
RGNSSLADKINTEKGSEMEQSGFNKRRAEGKDKSDKPKNLQLKTRKLNPVNTISYVQILG
TGMDTQDTCPSVLLFFDKQRFIFNAGEGLQRYCTEHKIKLSKIDHIFLSRVCSETAGGLP
GLLLTMAGIGDEGMCVNMWGPSDLNYLVNAMRAFIPSAAMVHTKSFGPTLQLDGLAALDS
KKFSGPFDLIDDEVVKISAILLNPKENIGPASDTGNGELGPPLKPGDISVIYVCELPKIQ
GRFHPEKAKALGLRAGPKYRDLQNNISVKSDDRDIMVHPRDVMDPPIPGPIVLLVDCPTT
LHLQSLLSADSLNVYYTDFSGSMSETAKAVNCVIHLSPSSVSNSPDYQKWMKRFGQVQHI
MAGHEEKNVEIPVLKSSARIAARLNYLCPQFFPASGFWPPQIENNSLHSKSSNEEPQATI
SAENLLKFNLRPHANLGLDRSSVPLATGPAEIVDELRVEIPEIVEAVQQVRQLWDHPGEA
QNDVSSQDMMEEPWLDELGLPSCLENVTREDMEIVLLGTGSSQPSKYRNVTSIFINLFSK
GSLLFDCGEGTLGQLKRRFGVEGADDAVRNLRCIWISHIHADHHTGLARILALRRDLLKD
VPHEPLLVVGPGQLMRFLNAYQRLEELDMQFLDCKFTTRASWDSFEKSNSISDEPSSSNS
KSPVDSTLFTKGTPMQSYWQKPGSPVGNAVIFKMLSSLKNILQEASLEILISFPVVHCPQ
AYGVSLKAAQRSNKTGEMIPGWKIVYSGDTRPCPQLIEESRGATVLIHEATFEDGLADEA
VARNHSTTQEAIDVGEAAGVYRIILTHFSQRYPKIPVFGDAHMHNTCIGFDMMSINLADL
PVLPQVLPHLKLLFRNEMGVDEIEDLPLEEVTAAT
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaataacaagtctacgcctcctaattaacaattctcctccaaaattcacacct
ttcttctccaaaccaatcaaacatttctatctatcaactgttttctcttccctgtcaaaa
cccaacagaaaaaacttgcattctgcagctgcaaaaccctttattaatactaaaaacaac
aggggtaacagttctttagctgataaaattaatacagaaaaagggtctgaaatggagcaa
agtgggtttaataaacgaagggctgagggtaaagataagtctgataaacctaagaatctt
cagttgaaaactagaaagcttaatcctgttaataccatttcttatgttcagattctgggt
actggaatggatactcaagatacatgcccatctgtattgcttttctttgacaagcagaga
ttcatttttaatgccggagagggtttgcaacgctattgcacagagcataagattaagcta
tcaaagatagatcacatattcctttctcgagtctgctcagaaaccgcaggaggtctccca
ggtttgttgttgacaatggctggaataggggatgaaggaatgtgcgtaaacatgtggggg
ccttcagaccttaactacttggtcaatgcaatgagggcattcattccaagtgctgccatg
gttcacacaaaaagtttcggtcccacactacaacttgacgggttagctgcacttgattct
aagaagttttcaggaccctttgaccttattgatgatgaagtagtcaagatatcagccatt
ctcttgaacccgaaggagaatattggaccagcatctgatactggcaatggtgagcttggg
ccacctctaaagcctggtgatatctctgtcatctatgtgtgtgagttacctaaaattcaa
gggaggttccatcctgaaaaagctaaggctcttggactgagagctggtccgaagtatagg
gatttgcaaaataatatatcagtgaaatcggatgatcgtgatattatggtacatcctagg
gatgtgatggaccctcctattccagggcctatagttcttcttgtcgactgtcctacaact
ttacatttacaaagtttgttatctgcggattcactcaatgtgtactacacagatttctct
ggcagtatgtccgaaactgctaaggcagtgaattgtgtaatacatttaagtccgtcatct
gtttcaaatagccctgattatcaaaaatggatgaagagattcgggcaagtgcagcacatt
atggctggccatgaagagaaaaatgttgaaatccctgttctaaaatcaagtgccaggatt
gcagcgaggctaaattacttgtgtcctcaattttttcctgcttcagggttttggccgcct
cagattgagaataattcattacactccaagtcttcaaacgaggaacctcaagctaccatt
tctgccgagaatctccttaagttcaatttgcgtccacatgcgaacctcggtttggataga
tcttcagttccccttgcaactggacctgcggaaattgttgatgagttacgtgtggaaatt
ccagaaattgtagaagctgtgcagcaagttagacagttatgggatcatcctggagaagct
caaaatgatgtgtcatcacaggatatgatggaggagccgtggttggatgagctagggctt
ccaagttgtttagaaaacgtaactagagaagatatggagatagtcctgctaggtactggc
tcatcccagccctccaagtatagaaatgtgacctctatattcatcaatcttttctcaaag
gggagtttgctttttgattgtggtgaaggcactctaggtcaactaaaaagacgatttggg
gtagaaggtgccgatgatgctgtgagaaatttaaggtgtatatggatttctcatattcat
gctgaccatcatacaggtctagctagaatactcgctctacgacgtgatttactgaaggat
gttcctcatgaacctttgttagtagttgggccagggcagctaatgaggtttttaaatgca
taccagagacttgaggagctagatatgcaatttctggactgcaagttcacaacgcgtgct
tcttgggattcttttgagaaatctaactcgatttctgatgaaccttcatcgtcaaattca
aagagtcctgttgattccacactgttcactaaaggaaccccaatgcaaagctactggcaa
aagccgggtagcccagttggtaatgctgtcatctttaagatgttgagcagcttgaaaaac
attttgcaggaagcgagtttagagatcctgattagctttcctgtggttcactgtccacaa
gcatatggagtttctctaaaggcagctcagagatccaataaaactggtgagatgatacca
gggtggaagattgtatactctggggacacaaggccctgtccacaactcatagaagaatct
cgaggagccactgttctgatccatgaggcaacctttgaggatggcttggcagatgaagca
gtggctagaaatcatagcacgacacaggaggcgatagatgtgggagaggcggcgggtgtg
tatcgcataattcttacacatttcagccaaagataccccaagattcctgtgttcggagat
gcacacatgcacaacacttgtataggattcgacatgatgagcattaaccttgctgacttg
cctgttctccctcaggttcttcctcatcttaaactcctcttccgaaatgaaatgggggtt
gatgaaatcgaggatcttcctcttgaggaagtcactgcagccacttag
DBGET
integrated database retrieval system
