Silene latifolia (white campion): 141611236
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Entry
141611236 CDS
T11116
Name
(RefSeq) putative CoA ligase CCL6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00061
Fatty acid biosynthesis
slaf00071
Fatty acid degradation
slaf01100
Metabolic pathways
slaf01212
Fatty acid metabolism
slaf04146
Peroxisome
Module
slaf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
141611236
00071 Fatty acid degradation
141611236
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
141611236
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
slaf01004
]
141611236
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slaf04147
]
141611236
Enzymes [BR:
slaf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
141611236
Lipid biosynthesis proteins [BR:
slaf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
141611236
Exosome [BR:
slaf04147
]
Exosomal proteins
Exosomal proteins of breast milk
141611236
Exosomal proteins of breast cancer cells
141611236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
141611236
NCBI-ProteinID:
XP_074285832
LinkDB
All DBs
Position
11:17017715..17029294
Genome browser
AA seq
663 aa
AA seq
DB search
MVNGKIAMYTVKVGESREATANKPSAGPVYRCVYAKDGLTGVPHGLDSPWDLFSKSVEKF
PNNPMLGRRQIIDKKAGPYEWVTYKEVYDSAVRIGSAIRKCGVNPGGRCGIYGANCPEWI
ISMEACNSQGVSYVPLYDTLGANAVEFIVNHAEVSIVFVQEKKIPSMLACLPKCDCLKTI
VSFGDISSTQRKEAEDAGLSCFSWEEFAQLGTTDGEFPVKQKSNICTIMYTSGTTGEPKG
VILHNEAFLAEVYSMDYLLAETDKALAEDDVFFSFLPLAHIFDQIMETFSISRGASIGFW
QGDVRYLLEDLQELKPTIFCGVPRVFDRLYSGILSKVSSSGLLRKGLFDFAYNYKLRNME
KGLRQDEAAPLLDKVVFSKIKQSFGGRLRLMFSGGAPLPRHVEEFLRVTCCCPLTQGYGL
TESCGGSFTSFANVYSMISSVGVPLTTIEARLESVPEMGYDALSNIPRGEICLRGKTMFS
GYHKRQDLTDEVIVDGWFHTGDVGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENIESVYS
RCPLITSIWVYGNSFESFLVAVVVPEKKALEDWAESNQETGDFKTLCKSPKARNYLMEEL
NKTGKEHNIRGFEMLRVVHLEPNPFDFERDLITPTFKLKRPQLLKYYKDCINEMYNEAKG
SRA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgggaaaatagcaatgtacacggttaaagtgggtgaatcgagggaagcaacc
gcgaataaaccgtctgcagggccggtgtatcgctgtgtttacgcgaaagatgggcttact
ggtgttcctcatgggttagactctccttgggacctcttcagcaaatcagtggagaaattc
cccaataatcctatgctgggtcgtcgccaaatcattgataaaaaggctggtccatatgaa
tgggtgacatataaagaagtgtatgattcagctgtgagaattgggtctgctatcagaaaa
tgtggtgttaatcctggtggtcgatgtggaatttatggggccaattgccccgagtggatc
atttctatggaggcttgtaacagccaaggagtatcttatgtgcctctgtatgacacgctt
ggtgctaatgcagttgagttcatcgtcaaccacgctgaagtctccattgtttttgttcag
gagaaaaagataccatctatgctggcttgcttaccaaagtgtgactgcctcaaaacaatt
gttagttttggtgatatttctagcacacaaaggaaggaagctgaggatgctggcttgtct
tgcttctcctgggaagaattcgcacaactgggaactacagatggcgaatttcctgtaaaa
caaaagagcaacatctgcacaataatgtacacaagtggaacaacaggtgaaccaaaaggg
gtgattttacacaatgaagctttccttgcagaggtctactcaatggattaccttcttgca
gagacagacaaagcgcttgcagaagacgatgtattcttctcgtttcttccactagctcac
atatttgaccagataatggaaacatttagcatctccaggggagcttctataggattttgg
cagggagatgtgaggtatttgttagaggacctgcaagaattgaagccaactattttctgt
ggtgttccaagagtttttgaccgtttatattctggtatattgagtaaagtttcatcaagc
ggtttactcagaaagggactgtttgactttgcctataactataagctgaggaatatggag
aagggactacgccaagatgaagcagctccccttctagacaaagttgtttttagtaagatt
aaacaaagctttggaggacgtctgcgactcatgttttcaggaggcgcacctttgccacgt
catgtagaagaattcttgagggtcacttgttgctgtccattaacacaagggtatggtctc
actgaaagctgtggaggaagtttcacatcattcgcgaatgtgtactcaatgatcagctca
gttggtgtgcctttgactaccatagaagcgagactggaatcagttccagagatgggctac
gatgcattgtcaaacataccgcgtggagaaatttgtttgagaggcaaaacaatgttctct
ggttaccacaaaagacaagatctaactgatgaagttattgtagatggatggttccataca
ggtgatgtcggagaatggcagcctgatggttccatgaaaataattgacaggaagaaaaac
atatttaagctgtcacaaggagaatatgttgctgtcgagaacattgagagcgtatactcc
cggtgtcccctaataacatcaatttgggtttacggcaatagttttgagtcatttctagtg
gctgttgtcgttcctgagaaaaaggcacttgaagactgggcagaaagtaatcaagaaacc
ggagatttcaaaacactttgcaaaagtcccaaggcaaggaattatttaatggaagagctc
aataaaactggcaaagaacacaacattcgaggttttgagatgttacgggtagttcattta
gagcctaatccttttgatttcgagagggatctgattacgcctactttcaaattgaaaaga
ccccagctgctcaaatactacaaggactgcatcaatgagatgtacaatgaagcaaaggga
tcaagggcataa
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