Silene latifolia (white campion): 141611254
Help
Entry
141611254 CDS
T11116
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141611254
Spliceosome [BR:
slaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141611254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
PPR_1
HisG_C
NIL
Motif
Other DBs
NCBI-GeneID:
141611254
NCBI-ProteinID:
XP_074285855
LinkDB
All DBs
Position
11:17216969..17222141
Genome browser
AA seq
748 aa
AA seq
DB search
MQALTQLSPFLSLLSFTPSKPNSSTSLRCTGDNTVGYRNELQESFEMRKLQFKTPDLEMN
VKELEELPENWRRSKLAWLCKELPSHKSPTIFRLLTAHKKWMRQVDATYIAVHCLRIRHN
EAAFSVYKWMTQRPWFRFDFALATKLADYIGRERKVAKCREIFDDIINQGRVPSESTFHI
LIVAYLSVPDGDYLQQACEIYSQMIHLGAYRPRLSLQNSLFRAIIDKPANSAKQYLKQAE
FIFHNVVTCGLEVHKDIYGGLLWLHSYQDSIDKERMLYLRKEMHQQGFKESADILLSILR
ACSKEGDLVEAEMTWGKLLKCDGDLPYQAYVYKMQVHAKVGDFERSLNIFREMQKKLEQV
NVVAYHTIIEIMCSAQEVELAEALMEELIKSGLQPLISSFLDLLNMYFKLRLHDKVESTF
FECRQRCRPNRTVYSIYLESLVQTGNIVKAESIFSQMVENEEAIGVSARSCNVLLDGYLF
CGDHEKAKKLYGFMRENNYEAEPFLLEKLESVPTYNKKVVQKSVILKLTPAQREILVGLL
LGGLQIEYAEDKKKPFLRFEFKDNSAMHSVLKRHIYNKYHEWLQPSDSSRDDGENIPSKF
LTVPHAFFSFYADQFWSNGRRSIPTLIHRWLTPRVLAYWFMYNGYRTATGDILLKLQGNK
DDVERVLKALKSKSLEFRVKQKGKVFWVGFLESNSISFWRLIEPYILDDLRDILDADNQR
LDIQLSSESYSDYGEEPDSSGIYSNDGL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcactaacccaactttcaccattcctctctcttctcagcttcactccttcaaaa
cccaattcctcaacatccctgcgttgcacaggtgacaacacagtcggatacaggaatgaa
ctgcaagaatctttcgaaatgcgaaagctgcaattcaaaacacctgatttagagatgaat
gttaaggaacttgaagaattgcctgagaattggagacgttctaaacttgcttggctttgt
aaagaattaccgtctcataaatcgccaaccatttttcgacttcttactgctcataagaag
tggatgcgtcaagttgatgctacttatattgctgttcattgtttgcgtattcgtcataat
gaagctgctttttcggtttacaagtggatgacccaacgaccctggtttcgatttgatttt
gctctagctactaagcttgctgattacattggtagggagagaaaggttgctaaatgccga
gagatttttgatgacattatcaatcagggacgagtgccaagtgaatctactttccacatt
ttaattgttgcttatctaagtgtcccagacggcgactaccttcagcaagcatgtgaaatt
tacagccaaatgattcatttaggagcttaccggcctcggcttagcctgcagaatagtcta
ttcagggctattattgacaaacctgctaactctgctaagcagtatcttaaacaggccgag
tttattttccataatgtagttacatgtggattagaggtacacaaggatatttatggtggt
ctcctttggcttcatagttatcaggactccattgacaaagagcgaatgttatatctccga
aaagagatgcatcaacagggttttaaggagagtgcagacattctattatccattttgagg
gcttgctctaaggaaggtgatttggtcgaagcagagatgacttggggcaagcttctcaag
tgtgacggtgacttaccctatcaagcatatgtatacaaaatgcaagtccatgctaaggtt
ggggattttgaaaggtcgttgaacatttttagagaaatgcagaagaaattggaacaggtc
aatgtcgtggcataccatacgatcatcgagattatgtgcagtgctcaagaggtggagctt
gcagaagcacttatggaagagctcattaagagtggtctgcagcctcttatctcaagtttt
ttggatttgttaaatatgtacttcaaattaaggttacacgataaagtggagtcgaccttc
tttgagtgccgtcagagatgccgccccaatcgaactgtgtatagtatctacctggaatca
ttagtacaaactggcaatattgtaaaggcggaaagcatattcagccagatggtcgagaac
gaagaagctattggtgtgagcgccaggtcttgtaatgtccttttggacggatacctattc
tgtggagatcatgagaaggctaaaaaattatatggcttcatgcgcgagaataactatgag
gcagagccatttttgttggagaagctggagtcagttcctacgtataacaaaaaggttgtt
cagaaatctgtaatcttgaaacttacaccagcacaaagagagattttagtgggtttgctg
ctcggtggcttgcaaattgagtatgcggaggacaaaaagaaaccttttctacgttttgag
ttcaaagacaatagtgctatgcattctgtcctgaaaagacatatctataacaagtaccac
gagtggttgcaaccttcagattcttcaagagatgatggtgagaatattccttcaaagttt
ttgacagtcccacatgcgtttttcagtttctatgctgatcagttttggtcaaatggtaga
cgaagcattccaactttgattcatcgatggttgacacctcgtgttcttgcttactggttc
atgtataatggttacagaacagctactggagatatcttgttgaaattacagggtaataaa
gatgacgttgagagagtcttgaaagcattgaaatcaaagtcattggaattcagggtaaag
cagaaggggaaggtattttgggtggggtttctagaaagcaattcaatttccttctggaga
ctgattgagccatatatcttagatgacttacgagatatccttgatgctgataatcagcgt
ttggatatccagcttagtagtgaatcgtattctgattatggtgaggaaccagattcttcc
ggcatttacagcaatgatggtttgtaa
DBGET
integrated database retrieval system
