Silene latifolia (white campion): 141611256
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Entry
141611256 CDS
T11116
Name
(RefSeq) autophagy-related protein 2
KO
K17906
autophagy-related protein 2
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
141611256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141611256
03029 Mitochondrial biogenesis [BR:
slaf03029
]
141611256
Membrane trafficking [BR:
slaf04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
141611256
Mitochondrial biogenesis [BR:
slaf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
141611256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
141611256
NCBI-ProteinID:
XP_074285857
LinkDB
All DBs
Position
11:17379273..17396554
Genome browser
AA seq
1947 aa
AA seq
DB search
MFRRCVAKSVEALSRIAIKRACKFALKKKLGHFILGDIDLHQLDVQLAAGVILLSDLAIN
VDLLNSKLSQTSIIRVKEGSIGSLSVKLPWSAGGYEVEVDELELVLYPFCGDELGGVVET
HDSGVCYSTFHDDCGKGEADDVCTSSAAAASVDVHQGVKTVAKWVQQLLTRFHVRVKNVI
VAFDACVDNDGKTDGSHEALVLRVGEIECGTCLSDNDDVSADRSKAADLLGMTHLTNFLK
FQGVVLDLVRISSDVDKPLSESAEVSASCSSKASQPLIIGHKGGFGGSIKLSIPCKDGSL
DIRKVDADVKVDRLIAKLQPSTLKWILTTWDTLQNLDNKLVGSVYHMAADTHLSSSIPLD
KKTTETENPINFGNPFREKTAMGVLLKESQFIPDWIPDSSSEEGFEEADLGASVDQFFEC
LDGMRSSHSVLGSSGMWGWTSSYISAITAASNLASGSLNMSAEQQLLQTNLKISFVGVSA
FYSFLDEDQLTQLGPTGEQLDANPNVHHLGLIWEDIVVAVQVFPKTWRLEATVDHIVLNE
YMCQWGDSVDLTLHDHVNDHNSQTLLIQDLQRRVQKALPYSPFFGETSNVRDSGAPKNME
APSSVCCSANQECRSDIVTVTLFETSGATHCLFSASSGSSGGSSTGQASLSLKLPPFVFW
LSSDLVNMSLDILRNFDDFSRESKATINVSSEALKEQAAAQSSVSCSSNQHSTSIPSKGA
LVGNVLLPHGRIYLCFPLNKDKSLRSFSSWNEFIALDFSSPSNLMELKPEVPAFVREKTH
GKQDSSSPSHSMHLNVAILNLYYIIGLEDDSFDVEQGSHKFCAHRVLSLGSRTDWSRLIS
VVRRENAVTGAWIKKSAKLFATSDGPTCKASSSDYEFASVSSLEHRDNLSSLKEKLVLSS
KLCLHVCVPSTVVILSSTNYLCLVDLVKQTINSFASVGNDTDHEDKKNAISQTSILVECG
LVEILLELGQGSCVKSSLQRELPGSWHSLRLEVRNFEVLCISDLGAVTGAHFLWISHSEG
KLWGSVSMEADQDFMLISFNNSSNGRGDGEGSNVLSFRPAGSKFVLMSDPDSSHDFMSVV
LKCGTIIAPGGRLDWLDKLSSFFSLPSPDVELSTDCKLEKEDSKGVAFVIKLLDAALSYE
PYFRKSEVNEERAHSRSHVSVSLEDKSHDPHVACLLAASSLMLSNTVLADSLDNDYRIRL
QDVGLLLHEVSRSELILDEYSAGYLLGLGYVKVAEEALINAILKVNSEDDVSWELWCSEM
NIVLRTCHDTTFGLIRLASQIQQLFAPDIEESLVHLQNRWINFQEAQGREDLQGSSESSS
ICSPARSQSQHMVPDSNDISELAGLMGEICEDAFLLREKSVETCNGSQLSRDLNDVGPSS
SDARPESFLELGHTKGKIIEEYCLSDLRSLSDLTINSHFGEEISKLNLVRSGSLNLQEGN
SGWYERPPLRIVENYVADKTDRTCLKQLIECQQFDKEHNGSRLYKGRVFLKNANVKWQMY
AGSDWRESGQSRKICGRDGSVYLELAFISMDIQYDIFPDGGMCTSKLSVSVQDFHLSDQS
KNAPWRLVLGYYNSKEHPRESLSKAFKLDLEAVRPDPMTPLEEYRLRIAVLPILLHLHQS
QLDFLVAFFGNKGSPVEQQGDTEDSGVSDVSPSRDNKFNDDGIAEEALLPFFQKFDIKPF
VARVDYSPSRIDLAALSSGKYVELVNLVPWKGVELQLKHVQAAGVYGWNNVCETALGEWL
EDISQNQIHKLLKGLPTIRSFVAVGSGAAKLLSLPVKNYKKDYKLVKGLQRGTISFLRSI
SIEALGLGVHLVAGAHEVLLHAECILTRMQPSVSRPMRSKLKSSRGSEQPQDAQHGLQQA
CERLSSGLGKSASAIIHSPLKTYRRDGSAGSALVTAFKGAPAAAIAPASAAAQALHSALV
GVRNSLDPERKEESMNKYLGPNHSSKC
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtcgttgcgttgcgaaatcggtggaagcactttcacgtatcgccattaaaaga
gcttgtaagtttgctcttaagaagaagcttggtcacttcattttaggtgatattgatctt
catcagcttgatgttcaacttgctgctggtgttatacttctttctgatcttgctattaac
gttgaccttctcaattctaagttgagtcaaacttcgataattagagtgaaggaaggatca
attggctctttgtctgtgaaattgccttggagtgcgggaggttacgaagtcgaggtggat
gagcttgagcttgtgctttatccattttgtggtgacgaattgggtggtgtagttgaaacc
catgattccggtgtgtgttacagtacatttcatgatgactgtgggaaaggtgaagctgac
gatgtgtgtacatcgtcggctgctgctgcttctgttgatgttcatcaaggagtcaagact
gttgctaaatgggttcaacaattgcttacacgcttccatgtcagagtaaaaaatgtgatt
gtcgcttttgatgcgtgtgtagataacgatggtaaaacagatggttctcatgaggcattg
gttctccgcgtcggagaaattgaatgtggaacttgcctttcggataatgatgatgtgtct
gccgatcgttccaaagcagcagatcttcttgggatgacccacctgactaatttccttaag
tttcaaggagttgttcttgatcttgttcgaataagtagtgatgtcgataagccattgtcg
gaatcagctgaggtatctgcttcttgttcgtccaaggcctcccaacctcttataattggc
cataaaggtggttttggtggtagtataaagctctctattccctgcaaagatggatctttg
gatatacgcaaagtagacgcagacgtcaaagtagaccgtttgatagccaaactacagccc
agcaccttgaaatggatactaactacctgggatacgcttcaaaaccttgataacaagttg
gttggcagtgtctatcacatggcggcggacacccacttgtcatcttcgataccgttagat
aagaagaccacagaaactgagaatccaattaattttggtaatccatttagagaaaaaacc
gccatgggtgtgctccttaaagagtctcagttcataccggattggattcccgactcttcc
tcagaagagggatttgaagaggcagatctaggagccagtgtggatcagtttttcgagtgt
ttagatgggatgagaagttcccactctgtattgggcagcagcggcatgtggggttggact
tcttcttatatcagtgccataactgctgcttcaaatcttgcttctggttctctgaatatg
tctgctgagcagcagcttttgcaaacaaatcttaagattagttttgttggggtttctgca
ttttattcctttcttgatgaggatcaattgactcaactcggcccaaccggggagcaactt
gatgctaatccaaatgttcatcatcttgggttaatatgggaagacattgttgtagcagtt
caggtttttcccaagacttggagactagaagcaactgtggatcatattgtcctaaatgag
tacatgtgccagtggggggattctgtggatctcacattgcatgatcatgttaatgatcat
aatagtcagactctcttgattcaagatttgcaaagaagagttcagaaggctctgccttac
agtcccttttttggtgaaacatcaaatgtgagagattctggtgctccgaaaaatatggag
gctccatctagcgtctgctgctcggcaaaccaagagtgtaggagcgatatagtgactgtt
acgttgtttgaaacttccggtgctactcattgtctattttcggcaagctctggatcatct
ggtgggtcttctacagggcaagcatcattatcactcaagctgccaccatttgttttttgg
ctaagctctgatctggttaacatgtccttggatattttacgaaactttgatgatttttct
agagagagtaaagcaacaattaatgtctcatctgaagcccttaaagagcaagctgctgct
cagtctagtgtgagttgtagctctaatcaacattctacttctatacctagtaaaggggcc
ttggtaggaaacgtattacttcctcatggcagaatatatttatgctttcctttaaataaa
gacaaaagtctcagaagtttttcctcctggaatgaatttattgctcttgatttttcctcc
ccatcaaatcttatggaactaaaacctgaggtgcctgcttttgttagagaaaaaacacat
ggaaagcaagattcttcatctccttcccactccatgcatcttaatgttgctattctcaat
ttgtactatatcattggccttgaggatgatagttttgatgttgagcaaggaagccataaa
ttttgtgctcacagagttctgtctcttggtagcagaactgattggagtcgtctaatcagt
gtggtcaggcgtgaaaatgcagtaactggtgcttggattaagaagagtgcaaagcttttt
gctacatcagatggtccaacttgtaaggcgtcatcaagtgattatgagtttgcctctgta
tcttctttggaacatagagataatctctcttctttaaaagaaaagctggttttgagctca
aaattatgtcttcatgtttgtgtaccatctacagtggttatcctcagcagcaccaattat
ttatgtttggttgaccttgtgaagcagactatcaattcatttgcctctgttggcaatgac
acagatcatgaagataaaaaaaatgctatcagccaaacatcaatccttgttgagtgtggt
ctggtagaaattcttttggaactaggccagggcagttgcgtgaaaagctcattgcagaga
gagcttccagggtcatggcattcgttacgattggaagtccggaattttgaagtgctttgt
atatctgatctcggagctgttactggtgctcattttctatggatatcccattctgaaggg
aagttgtggggttctgtctctatggaggctgatcaagatttcatgctcatctcttttaac
aatagttcaaatggacgtggagacggagaaggctcaaatgttttatctttcaggccagcg
ggctctaaatttgtgcttatgtctgatccagacagttcccatgattttatgtctgtggtt
ttgaaatgtggaaccattatcgcgccaggtggtcgattagattggctggataagctttcc
tctttctttagcttgccatctcctgatgtggagctaagtactgactgtaagttagagaag
gaggattctaaaggagttgcctttgtaataaaacttcttgatgctgcactgagttacgag
ccatattttaggaagtcagaagtcaatgaagaacgtgctcattctaggtctcatgtgagt
gttagccttgaagataagtcacatgacccacatgttgcctgcttgttggctgcatcatct
ctgatgctttctaacacagtgttagcagatagccttgacaatgattacagaatcagactt
caagatgtaggtcttcttcttcatgaagtctcaagaagtgaattaattttggatgaatac
agtgctggttatttgcttggattaggctatgtgaaagtcgcagaggaggctctcattaat
gcaatcttgaaggtcaactctgaagatgacgtatcttgggaactgtggtgctctgaaatg
aacatagttctccgcacttgtcatgatacaacctttggcttaatacgcttggcttcccaa
atccagcagctttttgccccagatatcgaggagtcactggtacacttacaaaacaggtgg
atcaattttcaggaagcacaaggaagagaagatctacaagggtcatcagaaagcagcagc
atttgttcacctgcaagatctcagtcacaacatatggttccagattcaaacgatatatct
gagctagctggcttgatgggtgaaatatgtgaagatgcctttttgctgcgagaaaaaagt
gtagaaacttgcaatgggtcacaactcagtagggatttgaatgatgtgggtcctagctcc
tcggatgcaagacctgaaagttttctggaacttggtcatactaagggtaaaataatagaa
gaatattgcttatcagatttaagatccttgtcagacctaacaatcaatagccattttggg
gaagagatttctaagttgaatttggtgagaagtggaagtttgaatcttcaagaaggaaat
agtggatggtatgagaggccccccttaagaattgttgaaaattatgttgcagataaaaca
gatcgtacttgtttaaaacaattaatcgaatgccagcaatttgataaagaacacaatggt
tcccgactatacaaagggcgtgtatttctaaaaaatgcaaacgttaaatggcagatgtat
gctggttctgactggcgtgaatcggggcaatcccggaaaatttgtggaagagatggctcg
gtgtatctagaacttgcgtttattagcatggacattcaatacgacatctttccagatggg
ggcatgtgtacatcaaaactctctgtttctgttcaagattttcatctctctgatcaaagc
aaaaatgcaccatggagactggtgcttggatactataattctaaggagcaccccagagaa
tctctatctaaagcatttaagcttgacttggaagctgtcagaccagatccaatgactccc
ctcgaggagtataggttacgtatagctgtccttcctatattattgcatcttcatcagagc
cagcttgactttctggttgccttctttggaaataaggggtccccagttgaacaacaaggt
gatacagaggattcaggtgtatcagatgtaagtccaagtagagacaataagttcaatgat
gatggcatcgctgaggaggcattgcttccatttttccagaagttcgacatcaagcccttt
gttgcaagagttgattactctcctagccgtattgatcttgctgcattgagctcgggcaag
tatgtggaacttgtaaatctagttccatggaagggagttgagctgcaactcaaacatgtt
caagctgctggtgtttatggctggaacaatgtttgtgaaacagcacttggggaatggcta
gaagatatttctcaaaatcagattcacaagttattaaaggggcttccaaccattcgatcc
tttgttgctgttggctccggtgctgcaaaattgctatctttgccagtgaagaattacaag
aaggattacaaattggtgaagggtttacaaagaggcaccatatcatttctcagaagcatc
tcaatcgaagctctaggacttggtgttcatttggtagctggggctcatgaagttctgttg
catgctgagtgtatacttacacgcatgcagccgtctgtttcccgacctatgaggagtaaa
ctgaagtcaagccgtgggtctgagcaaccacaagatgctcaacatggactgcaacaggcg
tgtgagagacttagcagtggtttgggaaagtctgcatctgcaataattcatagtccatta
aaaacgtatcggcgtgatggtagtgctggttcagctctggtgacagctttcaagggagct
cctgctgctgccatagcgcctgcttctgctgctgcacaagctcttcactctgctcttgtt
ggtgtcaggaacagccttgatcctgaacgtaaggaggaatctatgaacaaatacttgggg
ccaaatcactcctcgaagtgctga
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integrated database retrieval system
