Silene latifolia (white campion): 141611541 Help Entry 141611541         CDS       T11116                                  Name (RefSeq) coatomer subunit alpha-1-like   KO K05236   coatomer subunit alpha Organism slaf  Silene latifolia (white campion) Brite KEGG Orthology (KO) [BR:slaf00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:slaf04131]     141611541   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:slaf04147]     141611541 Membrane trafficking [BR:slaf04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     141611541 Exosome [BR:slaf04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    141611541   Exosomal proteins of bladder cancer cells    141611541 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I TPR_COPA_B Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR41 Beta-prop_SPT8 NBCH_WD40 Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_RIG_2nd Beta-prop_IP5PC_F DUF6956 Motif Other DBs NCBI-GeneID:  141611541 NCBI-ProteinID:  XP_074286208 LinkDB All DBs Position 11:complement(38619643..38626850) Genome browser AA seq 1214 aa AA seqDB search MLTKFESKSSRVKGLSFHSKRPWILASLHSGVIQLWDYRNGTLLDRFDEHDGPVRGVHFH QSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW NWQSRTCIAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKSASPADDLMR LSQMNSDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE VDTLRGHMNNVSSVIFHAKQDIIVSNSEDKSIRVWDVTKRTGIQTFRREHDRFWILVAHP EINLLAAGHDSGIIVFKLERERPAFSVSGDVLFYAKDRFLRFFEFSTQRDTQVVPIRRPG STSLNQGPRTLSYSPTENAVLICSDVDGGSYELYIVPKDASGRGDVAQEAKRGVGGSAVF IARNRFAVLDKSHNQVMVKNLKNEIVKKSPLPIATDAIFYAGTGNVLCRSEDRVIIFDLQ QRIVLGELQTPFVKYVVWSNDMQTVALLSKHVIVIANKELVHQCTLHETIRVKSGAWDDN GVFIYTTLNHIKYCLPNGDSGIIKTLDFPIYITKVSGNTLFCLERDGKNKAIVIDATEYI FKLNLLRKRYDHVMSMIRNSELVGQAMIAYLQQKGFPEVALHFVKDEKTRFNLALESGNI QIAVASAKEIDEKDHWYRLGLEALRQGNTGIVEYAYQRTKNFERLSFLYLITGNTEKSTK MLKIAEVKNDVMGQFHNALYLGDVQERVKILEDAGHLPLAYMTASVHGLHDVAERLASKL GDDIPTLPSGKVPSLLIPPAPVKCAGDWPLLRVMKGIFDGGIDLGRGAPEEEEEESGADW GESLEEDVEITNGITENLSDREEAEENEEAGGWDLEDLDLPLEEDTPKVSASSRSSMFVT PSPGMPVSQIWTQKSSLAAEHAAAGNFDTAMRLLSRQLGIKNFSPLKSMFVDLHAGSQTY LRALTSAPIISVALERGWSESLSPNVRGPPALVFSFSQLEDKLKSGYKSTTAGKLSEALT IFVAILHTIPLIVVESRREVDEVKELIVIVKEYVLGLKMEITRRELKDDPKRQQELAAYF THCNLQTPHLRLALQMAMRVCYNAKNLSTAANFARRLLETNPPSEQQAKQARQILQAAER NMTDAVKLNYDFRNPFVVCGASYVPIYRGQKDVSCPYCTARFVPEQEGKICNVCELALVG ADASGLLCSPSQKR NT seq 3645 nt NT seq  +upstreamnt  +downstreamnt atgttgacgaagtttgagagtaagagtagtagggtcaagggactgagtttccatagtaag aggccatggatcttggcaagtcttcacagtggtgtgatccagctatgggattaccggaat ggtactcttcttgatcgttttgatgaacatgatggccctgttcgtggtgttcatttccat caatctcagccgttgtttgtgtctgggggtgatgactacaagattaaagtttggaactac aaattgcacaggtgtctttttacccttcttggacatcttgattacattcggaccgtgcag tttcaccatgagaacccatggattgtgagtgccagtgatgaccagactattcgcatttgg aactggcaatcacggacatgtattgcagtcttgacagggcacaatcattatgtgatgtgt gcctcctttcatcctaaagaagaccttgtcgtgtcagcttcgcttgaccagacagttcgg gtctgggatatcggagccctaaggaagaaaagtgcatctcctgcagatgacttaatgcgg ttgagtcaaatgaattcagatctttttggtggtgtcgatgccgtggttaagtatgttttg gaaggccatgataggggagttaactgggcatcattccatcctacactccccttaattgta tctggggctgatgaccgacaagtaaaattgtggcgcatgaatgatacaaaggcttgggaa gtagacacattgagggggcacatgaataatgtgtccagtgtcatattccatgccaagcag gatattattgtttcaaattcagaggacaaaagcattcgtgtatgggatgtaacaaagcga actggtattcaaacattccgccgggaacatgatagattttggattctcgtagctcatcct gagatcaatctcctagctgctggccacgatagtgggattattgtctttaaattggagagg gaacgaccagcattttctgtcagcggtgatgtattgttttacgcaaaagatcgtttcttg cggttttttgaattctccactcaacgtgatacacaagtggttccaattcgtcggcctggc tcaacaagcttaaaccaaggtcctaggactctttcttatagccctactgagaatgctgtt ctcatatgttctgatgtcgatggtgggtcctatgagctctatattgtacccaaagatgcc tctggaaggggtgatgtggcacaagaagcgaaaaggggtgttggaggatctgctgttttt attgctcgcaacaggtttgcagtgcttgacaaaagccacaatcaagtcatggtgaaaaac ctgaagaatgaaattgtgaagaagagtcccttacctattgccactgacgcaatattctat gcagggactggaaatgtgctgtgtaggtcagaggatagagttattattttcgacttgcag cagagaatcgttcttggtgagcttcaaaccccctttgtgaagtatgtggtgtggtcaaat gacatgcagactgttgccttgctaagcaaacatgtcatcgtgattgctaataaggagctt gttcaccagtgtactctccacgagacaattcgtgttaagagtggagcctgggatgacaat ggagtttttatctatacaactcttaatcacattaagtattgtcttcccaatggagatagt ggcattatcaaaacacttgatttcccaatttacatcaccaaagtttctggcaatacactt ttttgcttggaacgagatggaaagaataaggctatagttattgatgctactgagtatatt ttcaagctaaatttattgaggaagagatacgatcatgtcatgtcaatgatacgaaactcc gaactcgtggggcaagctatgattgcttatttgcagcagaaggggtttccagaagttgct ttgcattttgtaaaagacgagaaaacccggttcaatttagctttggaaagtggaaatatt caaattgcagttgcttcagccaaggaaattgatgagaaagatcactggtaccgactaggg ttggaggctcttcgccagggtaatactggtattgtggaatatgcttaccagaggactaaa aatttcgagagactttcttttctttatttgataacagggaacacggagaaatctaccaaa atgttgaaaattgcggaggtgaaaaacgatgtcatgggtcaatttcataatgccctttat ttgggcgacgttcaggagcgtgtcaagatcttagaagatgccggtcatttgcctctggca tacatgacggcatcggttcacggccttcatgatgttgccgagaggctggcttctaaatta ggagatgatattcctactttgccctcgggaaaggttccctcccttctgatacctccggca cctgttaaatgtgccggcgattggcctcttctgagagtgatgaagggtatctttgatggc ggaattgaccttgggaggggtgctcccgaagaagaggaagaggaaagcggagctgattgg ggcgaaagtttggaggaagatgtagagataacaaatggaattactgaaaatttatctgat agagaagaagctgaagagaatgaggaagctggaggttgggaccttgaggatttggatctg cctctagaggaagatactcctaaagtctcggctagttcccgttcttcaatgttcgtgact ccaagtcccggcatgcccgtcagccaaatctggacccagaagtcgtctctcgcagccgag catgctgctgccggaaactttgatactgctatgcggttgctgagtcggcaacttgggatc aaaaatttttctccattgaagtccatgtttgttgaccttcatgcaggaagtcaaacttat ttgcgtgcacttacttctgctcccatcatatccgttgccttggaaagaggatggagtgaa tctttaagcccaaatgtgagggggccacctgctttagtgtttagtttctctcaattggaa gataagctcaagtctggttacaaatccacaaccgctggtaaattgtcagaagctctcacc atattcgtagccatcttacataccattcctctgatagttgtcgagtcgagacgagaggtt gacgaagtcaaagagttaattgtaattgtcaaggagtatgtattgggtctaaagatggag atcacgaggagagaattgaaagatgatccaaagcgtcaacaagagttagctgcgtatttc actcactgcaaccttcaaacccctcacttgcgacttgccctacaaatggctatgcgggtt tgctataatgccaagaatcttagcacagctgctaactttgcccgacgactacttgaaaca aaccctcctagtgagcaacaagcaaaacaagcccggcaaattttacaggcagctgagcga aacatgactgatgctgtgaaactaaactatgattttaggaacccttttgtggtatgtggc gccagctacgtgccgatttaccgtggtcaaaaggatgtgtcctgcccctattgtaccgcc cgttttgtaccggaacaggagggaaagatctgtaatgtttgtgagcttgcactggttggg gctgatgcttctggtttgctgtgttccccatctcagaaaagataa

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