KEGG   Silene latifolia (white campion): 141611566
Entry
141611566         CDS       T11116                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
slaf  Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:slaf03016]
    141611566
Enzymes [BR:slaf01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     141611566
Transfer RNA biogenesis [BR:slaf03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    141611566
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf_CCCH_4 zf-CCCH_PARP12 zf-CCCH_2 zf-CCCH_9 PEP_mutase zf-CCCH_PAN3
Other DBs
NCBI-GeneID: 141611566
NCBI-ProteinID: XP_074286243
LinkDB
Position
11:43140979..43148015
AA seq 735 aa
MADSASESNVLNSAIETLNEPPLTESSQSAMAESETEANVLNSATETPNEPPLPESNQSE
LDESATESSALNSVSTLTTEELVAKSIAPVKKEFLRPPPISRSSAAEVDKENANGDNRRE
KKSIVKDKKSKRQLKRERQNERKSALNLCPVVAKTEDVGACQYGDKCRFSHDVEAYKSQR
PADLEGECPFVTAKKRCPYGMTCRYIGTHVAVSDEILDDLREGSEVNVLKKDVQKLLWKN
KMKFPKSNTALKRLGLEGKGFTRVTDTDTKEEADPAVSNGSHISDENGCEKGDTVGKPVE
SSVLLEGGSLDGVSGTDDIRPLKKAKAEDEEKPCSDDTNNGDAVMKDSFDDKPCSASENT
SMETDASLKLQPRERKLIDFRGKMYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLL
QGQASEWALLRRHKSEDLFGVQICGAYPDTVARAVELIDQECSVDFIDINMGCPIDLVVN
KGAGSALLTKPMRMKNVIQAACASAEKPITVKVRTGYIEGRNRVDSLISDIYDWGASALT
IHGRSRQQRYSKLADWEYVYKCVQKAPSSLPVLGNGDVFSYLDWNNHLSDCPELSSCMIA
RGALIKPWLFTEIKEQRHWDISSGERLEILKDYVRFGLEHWGSDTKGVETTRHFLLEWLS
YMFRYVPVGLLEVVPQRLNWRPPSYFGRDDLETMMASESAADWIRISEMLLGKVPDGFNF
APKHKSNAYDSAENG
NT seq 2208 nt   +upstreamnt  +downstreamnt
atggccgattccgcttccgagtcaaacgtcctaaactcggctatcgaaacacttaacgag
ccgccgctaaccgagtcaagtcagtccgccatggcagagtccgagaccgaggcaaacgtc
cttaactcggctaccgaaacacctaacgagccgccgctacccgagtcaaatcagtctgaa
ttggacgagtccgctaccgagtcaagcgcgctcaactcggtgtctactttaacgacggag
gagctggtggcgaagtcaatagctccggtgaaaaaggaattcctacggccgcctccgatt
agcaggtcgtccgcggctgaagttgacaaggagaatgctaatggcgacaatcgccgcgaa
aagaagagtatcgtcaaggataagaagtctaagcgccagctcaagcgagaacgccagaat
gaaagaaagtctgccctaaacctttgtccagtggttgccaagactgaagatgttggtgca
tgtcaatatggtgacaagtgtcgttttagccatgatgtggaagcttataaatcacagagg
ccagctgatctcgagggagaatgcccatttgtgacagctaagaaacgctgcccttatgga
atgacttgcagatatattggtactcatgtagctgtctctgatgagattttggatgatttg
cgggagggctctgaagtgaatgtgttgaagaaagacgttcaaaagcttctatggaagaac
aaaatgaaattcccaaagtcgaatactgctctcaaacggcttgggcttgaggggaagggc
ttcacacgagtaacagatactgacactaaggaagaggctgatcctgctgtttccaatggc
tctcatatttcagacgaaaatggttgtgaaaagggtgacactgttggtaaacccgtcgag
tcttctgtgcttctagaagggggatctcttgatggtgtttctggcacagatgacatcaga
cccttgaagaaggcaaaagcagaggatgaagagaaaccttgttccgatgacacaaataat
ggagatgccgtaatgaaggattcctttgatgataagccatgtagtgcaagtgagaatact
tcaatggaaacggacgctagcttgaaattgcagccgcgtgagagaaaactgatagacttc
agagggaagatgtatcttgcacccctgactactgttggcaatcttccttttcgtagagtt
tgcaaggttttaggagctgatgtcacatgtggtgaaatggctatgtgcaccaatcttctt
cagggacaagcttcagaatgggcattgctgagacgacataaatcggaggatctgtttggc
gtacaaatttgtggtgcttatcctgatactgtagcgcgtgctgttgagcttattgaccaa
gaatgctcagttgacttcattgatattaatatggggtgcccgattgaccttgtcgtgaac
aaaggggctggatcagctcttcttactaagcctatgcgtatgaaaaatgttatacaagca
gcttgtgcttctgcagagaagcctataactgtcaaggtgagaactggctacattgaaggt
agaaatcgtgttgactcgttaatatctgacatatatgactggggagcttctgctctaaca
atacatggtaggtcccgccagcaacgatatagcaaacttgcggattgggagtatgtatac
aaatgtgtacagaaagctcccagctcattaccagtactgggaaatggagatgtcttttcc
tatctagactggaacaatcacttgtctgactgcccggagctttcttcatgcatgatagct
cgaggagccttgataaagccttggctattcactgaaatcaaggaacaaaggcattgggac
attagttctggtgaacgactggaaatactgaaagactatgtacgttttggccttgagcac
tggggttccgataccaaaggagtggagacaacaaggcactttttattggaatggcttagc
tatatgttcagatacgtacctgttggcctactggaggttgttccacaaagattgaactgg
cgtccgccttcatactttggtcgagatgacctggaaactatgatggcctctgaatctgca
gctgactggattcggatatctgagatgttgcttggaaaggttcctgatggattcaatttt
gcaccgaagcataaatcgaatgcttatgatagtgcagagaatggttga

DBGET integrated database retrieval system