Silene latifolia (white campion): 141611984
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Entry
141611984 CDS
T11116
Name
(RefSeq) F-box protein SKP2A-like isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141611984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141611984
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
141611984
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Motif
Pfam:
LRR_At5g56370
LRR_6
DUF7885
LRR_4
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
141611984
NCBI-ProteinID:
XP_074286771
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Position
11:156049706..156054298
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AA seq
260 aa
AA seq
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MLLLLTRWCKNNMNYLVLTLAAKFTRLQTLILRQDKAQLEDNVVETIANFYYDIRELDLS
KRFKVIDRSLYALAHGCPNLTKLNISGCTTFNDSGVAYLTSFCKKLKSLNRCECGRAATN
RALQAIVYNCSELQTLNLGWCENVGVLGVTSLAYGCPNLRALDLCGCVLITDESVIALAN
ICPHLRSLGLYYSQNITDRVMYSLAQRVRNKHAVWQSIKTRYEDDGLINLNISQCTALTP
PAVQAVCDSFSSLHTCPGRN
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgttattgttgctgactcgctggtgcaaaaacaacatgaattacttagtcctaactctt
gcagctaagttcacaagattgcaaactttaatacttcgtcaagataaggcacaactcgag
gataatgttgttgagactatagccaatttctactatgatatacgggaacttgacttaagc
aagagattcaaagtaattgatcgctctttgtatgcgttggcacatggttgcccaaatctc
acaaaactgaacatcagtgggtgcacaacgttcaatgattctggagttgcatatctaacg
agcttttgcaagaagttgaagtcactaaatcgttgcgaatgtgggagggcagccactaac
cgagcattgcaggccattgtgtataactgtagcgaactgcagactctgaatttagggtgg
tgtgaaaatgttggagttttgggcgttactagtctggcctatggttgtccaaatctcaga
gctttggacttgtgcggttgtgtccttataacagatgagagtgtgatagcgttggcaaat
atatgcccccatctcagatctctaggtctgtactattcccagaacatcactgatagagta
atgtactctttggcccagagagtaagaaacaagcatgctgtgtggcagtccatcaaaacc
cgttatgaagatgacgggctcataaacctcaacataagtcaatgcactgccttgacccca
ccagctgttcaggcagtctgcgactccttttcgtcccttcacacttgtcctggaagaaat
tga
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