Silene latifolia (white campion): 141612058
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Entry
141612058 CDS
T11116
Name
(RefSeq) SWI/SNF complex subunit SWI3B isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141612058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slaf03021
]
141612058
03036 Chromosome and associated proteins [BR:
slaf03036
]
141612058
Transcription machinery [BR:
slaf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
141612058
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
141612058
PBAF complex
141612058
GBAF(ncBAF) complex
141612058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
Myb_DNA-bind_7
Methyltransf_30
Motif
Other DBs
NCBI-GeneID:
141612058
NCBI-ProteinID:
XP_074286861
LinkDB
All DBs
Position
1:complement(172940800..172946202)
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AA seq
491 aa
AA seq
DB search
MSDQLQHPPIPQAPPSSTDATVPSAITTDAPPSTPLSDSKKSAPEPDTVAVPTYSSWFTW
NGIHEVEYKNMTEFFDGKSPSKNPTIYKYYRNAIVKKFRLNSSRKLTFTEVRRTIVGDVG
SIRRVFDFLEAWGLVNYSPPPATGKQQYKSEDKEGKSISAANAAANAAVGGDGGVMEANL
NSNQKARKWCSGCMTVCTIACFVCDKYDLVLCARCYVRGNYRVGVHSTEFRRVEISEPAK
TEWTDKETLQLLEAIMHYGDDWKRVAEHVAGRSEKDCVARFIKLPFGEQFVEPTDLNPED
SLACQIKGQTDAECGAEPDAKKMRLTPLADASNPIMAQAAFLSALAGVEVSEAAAQAAVA
TLYDMGHFTSRVSGQSQALPITEQETGAGNSSFQSTEEALTVAERELKQEEDEFLKSIST
ITDVKMKEIVDKIGRLEAMDCQLEREWKEWHQMKHQLFLDKLSLLFHKTAAPKAPEIATE
ENVRKELTTSS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccaactccaacaccctcccatacctcaggcgccaccctcctccaccgacgcc
accgttccatccgccatcaccacagacgctccaccgtcaactccgctttccgattccaaa
aaatccgcacccgaacccgacaccgttgccgtcccaacctactcaagttggttcacatgg
aacggcatacacgaggtagagtacaagaacatgaccgaattcttcgacggtaaatctccg
tccaaaaaccctacgatttacaaatattaccgtaacgccattgttaagaagttccgatta
aattcatctcggaaattgacgtttacggaggtccggcgtacaattgtcggtgatgtcgga
tcaattcggcgagtttttgattttctcgaagcgtggggccttgttaattactcgccgcct
ccggctacggggaaacagcagtataagtctgaggataaggagggaaagtcgatttctgct
gccaatgccgctgcgaatgctgctgttggcggtgatggaggtgtgatggaagcgaatctg
aattcgaatcagaaagcaaggaagtggtgtagtggttgtatgactgtttgcaccattgct
tgttttgtttgtgataaatatgaccttgtgctttgtgcacgatgctacgttcgtggaaat
tatagggttggagtccattctacagaattcaggcgggttgagattagcgaaccagcaaag
acagaatggactgacaaagaaacgttgcaacttctagaagccataatgcattatggtgat
gactggaaacgtgtggctgaacatgttgctggtcgaagcgaaaaagattgtgttgctcgt
tttattaagcttccttttggggagcagtttgtggaacctacggaccttaatccagaagac
agcttagcttgtcaaattaagggccaaacagatgctgaatgtggagctgaacctgatgcc
aagaaaatgcgtctcacacctcttgctgatgcaagcaatccaataatggcccaggctgcc
tttttgtctgctctggctggagttgaggtctcagaagctgctgctcaagcagcagtagca
actctatatgacatgggtcattttacaagtagagttagtggtcagtcgcaagcccttcct
attacggagcaagaaactggtgcaggtaattcctcatttcaatcaactgaagaagctctt
acagttgcagagcgagagctgaagcaggaagaggatgagtttttgaagtcaatatcaacc
attaccgatgttaagatgaaagagatcgtagataagattggccgattggaagcaatggac
tgccaattagaaagggaatggaaggaatggcaccagatgaagcatcagctcttcctagat
aagctctctcttctatttcataaaacggctgcccccaaagctccggaaattgctacagag
gaaaatgtcagaaaagaattgacaacttctagttag
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