KEGG   Silene latifolia (white campion): 141612360
Entry
141612360         CDS       T11116                                 
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03010  Ribosome
slaf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    141612360
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    141612360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:slaf03011]
    141612360
   04121 Ubiquitin system [BR:slaf04121]
    141612360
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:slaf04147]
    141612360
Ribosome [BR:slaf03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    141612360
  Archaea
    141612360
Ubiquitin system [BR:slaf04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   141612360
Exosome [BR:slaf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   141612360
  Exosomal proteins of colorectal cancer cells
   141612360
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD Thioredox_PDIA6_C OTU1_UBXL Ubiquitin_5 Fer2_3
Other DBs
NCBI-GeneID: 141612360
NCBI-ProteinID: XP_074287216
LinkDB
Position
11:203314760..203315550
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtaaaaaccctaaccggcaaaacaatcaccctagaagtcgaatcctct
gacacaatcgacaatgtcaaaaccaaaatccaagacaaagaaggaatcccaccagaccaa
cagcgtctaatcttcgccggaaaacaactcgaagacggccgtaccctcgccgactacaac
atccagaaggaatcaaccctccacctcgtcctccgtctccgcggtggtgcgaaaaagagg
aagaagaagacttacaccaagcccaagaagatcaagcacaaacatcgcaaagtcaagctt
gctgtgttgcagttttacaaggttgatgatagtggaaaggttcagaggttgaggaaggag
tgtcctaatgctgaatgtggtgctggaactttcatggcgaatcattttgatcgccattat
tgtgggaagtgtgggcttacttatgtttatcagaaagccggcggcgattga

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