Silene latifolia (white campion): 141612429
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Entry
141612429 CDS
T11116
Name
(RefSeq) putative E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141612429
04121 Ubiquitin system [BR:
slaf04121
]
141612429
Enzymes [BR:
slaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141612429
Membrane trafficking [BR:
slaf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
141612429
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141612429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING-like
zf-RING_16
HTH_NOL4_2nd
zf-Nse
zf-HC5HC2H_2
FlhC
DUF7563
zf-C3H2C3
Prok-RING_4
Anti-TRAP
Motif
Other DBs
NCBI-GeneID:
141612429
NCBI-ProteinID:
XP_074287304
LinkDB
All DBs
Position
11:205497467..205499286
Genome browser
AA seq
385 aa
AA seq
DB search
MSTTSSTPNTSSYWCYRCNRFVRVFNNNNLDSMICPDCNGGFVEQIDSPRRRFPSTTVSS
AANPTISSSPRLRRSRRNGGDRSPFNPVIVLRAPSEDIAAVNAAVAGGGGGGYELYYDDG
GGSGLRPLPPSVSEFLLGSGFDRLLDQLAQLEMNGIQRSEQPPASKAAIESMPTIKIVDN
HVNLDSHCAVCKEAFELGVEAREMPCKHIYHSDCILPWLNLRNSCPVCRHELATDVSTSL
ASPARPNVVESGEDETVGLTIWRLPGGGFAVGRFSGGRRAGGSGGERELPVVYTEMDGGF
NNQGGGVPRRISWGSRGGSHRESGGIRRALRNLFSCFNGGGGGVMGNLEDSTSSSSDSRS
RSLSIFGSGSRRNRGFDLGGRVRRW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgacgtcgtcgactcccaacacgtcgtcgtattggtgttacagatgcaatcga
ttcgttagggttttcaacaacaacaacctcgattcaatgatttgccctgattgcaacggc
ggatttgtcgaacaaatcgactctccacgacgtcgttttccctccaccaccgtctcctcc
gccgcaaaccccaccatatcctcatcccctcgcctccgtcgcagccgtcgtaacggcggc
gatcgatctccgttcaaccccgtcatcgtgttacgtgccccgtctgaagatatagctgct
gtcaacgccgccgtcgccggaggcggcggcggcggttacgagctgtactacgacgacgga
ggcggttcaggtctaagaccacttccacccagcgtttccgagtttttactcggttcgggt
ttcgatcggttacttgatcagcttgctcagcttgaaatgaacggaattcagaggtcggaa
caaccgccggcatcgaaagcggctatcgaatcgatgccgactattaaaattgttgataat
catgttaatttagattcgcattgtgctgtgtgtaaagaggcgtttgaattgggtgtagaa
gcgagggaaatgccttgtaaacatatttatcacagtgattgtatacttccatggttgaat
ttacggaattcgtgtcccgtttgtcgacacgagctggcgaccgacgtttccacctcgctg
gcgtcgccagcgaggccgaatgtggtcgaaagcggtgaggatgagacggttgggttgacg
atttggaggttaccgggtggagggtttgctgtaggtaggttttccggtgggagacgggct
ggtgggagcgggggtgagagggaattaccggttgtttatacggagatggacggcgggttt
aataatcaaggtggcggagttccgaggaggatttcgtgggggagtagaggtgggagtcat
agggagagtggtgggattaggagagctttgagaaatttgttttcttgttttaatggcggt
ggtggtggggtgatggggaatttggaggattccacgagttctagctcggattctaggagt
aggtctttgtcgatatttgggtcgggttctaggaggaatcgtgggtttgatttgggtggg
agggttcggaggtggtga
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