Silene latifolia (white campion): 141612451
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Entry
141612451 CDS
T11116
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2
KO
K11644
paired amphipathic helix protein Sin3a
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slaf03036
]
141612451
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
141612451
REST complex
141612451
Heterochromatin formation proteins
Other heterochromatin formation proteins
141612451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
TetR_C_35
Motif
Other DBs
NCBI-GeneID:
141612451
NCBI-ProteinID:
XP_074287328
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All DBs
Position
11:complement(206080561..206097017)
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AA seq
1316 aa
AA seq
DB search
MKRLREESYIGSQFKRPFGTSRGESYGQPQNTVAVGGVGGQKLTTDDALHYLKEVKEMFQ
DRREKYEHFLEVMKDFKAQRIDTEGVIAQVKELFKGHNNLIFGFNTFLPKGYEITLDDED
PPPKKVVQFEEAINFVNKIKNRFQDDDQVYKSFLDILNMYRKEHKNISEVYDEVSQLFED
HSDLLEEFTRFLPDTSSSAAIHHSSLDARSNLLRYDERSGTVRTSQPMRMNKRWRDRDRV
STSHGDHDLSGERPELDGDKLMMRSHKDQRKREKENRDRRNHDVDDRENEDDINRDFSVQ
RLSDKKKPARKVEDFRTAPAFGPSDDKNALKSMYSQEFHFCEEVKEKLGPDDYQAFLKCL
HIYSTEIITRSELQNFVADLLGKYPDLMEGFSKFLERCENIYGFLAGVMNKKSLLSDGPL
PRRVKADDKDKGPKCEIDSAKEKPNEDYSSKSIQELDLSNCKRCTPSYRLLPDDYPIPTA
SQRSEIGERVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFKCEDDRFELDMLLESVSSTA
KKVEELLDSVNGSSITKDAPIHIEEHFTPLNLRCIERLYGDHGLDVMDILRKNPALALPV
ILTRLKQKQEEWTKCRADFNKVWAEIYAKNHFKSLDHRSFYFKQQDSKNLSTKSLVADIR
ELKESMQKEDDMVLAVAAGNKRSLVPHLKFEYSDRDIHEDIYKLIKFSCEEVVTTKEQLN
KVMRLWTTFLEPILGVTSHTHDGEYVKARQLSGRDGMKAEMVESPLVDGATINGKKPRLV
VDGVESSRDARTNATTKEQTGKKGSSSNAQSNILNDASVGYSALAQNVVQSHHGRNNVEA
ALGPLSIPPGMRNGDAQEPKSSTDAVQPQSKAADTLAGMTTEASTLISKASRHLEKTVSQ
SEVDKEEGEMPPKAKYSIKNQQNRDDIIENGGLEDEVDAENEDSENASEGGDDLSVDESA
GDECSREEHEEEEDVEHDELEGKAESEGEAEVHHLCGDVGSLKLSESFLSAKPLSKYNSL
ASRDADKSDFRVFYGNDDFYALFRLHRMLYERILTAKTNSTCSESKWKNSKDSNHLDPYA
SFMTALYNLLDGLSDNAKFEDDCRAIIGNQSYVLFTLDKLIYKLVKQLQAIATDETDNKL
LQLYEYERSRRPSKFLDSVYHENARVILHEDNIYRVEFASSPDRMSMQLMDDENEKPEMV
AVSLDPNFAAYLYNDFFSVVSRSREPKGIMLQRNKKLYADLDEYSASSKAVKGVHLSNGL
ECKVSCSSSKISYVLDTEDFFFRTKRERKSLSVDVSRKLNQARGHRFIRFLSVASQ
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgaagagattacgtgaagaaagttatattgggtctcaatttaaacgaccctttggaact
tctcgaggcgaatcatatggacaaccccaaaacacagttgcggttggtggtgtgggagga
cagaaactaacgacagacgacgcccttcattatcttaaagaagtgaaagagatgttccag
gaccgaagggaaaaatatgagcactttcttgaggtcatgaaagatttcaaggctcaaaga
attgatacagagggtgtcatagctcaggtcaaagagttattcaaaggacacaataacctt
atatttggatttaacacatttctgcctaagggctatgagatcacattggatgacgaggat
cctcctccaaagaaggtcgtgcagtttgaagaagctataaatttcgttaataagataaag
aatcgatttcaagatgatgatcaagtgtataaatctttccttgacatattaaatatgtac
cgtaaggagcataaaaacataagtgaagtgtacgatgaggtttcccagctttttgaggat
cactctgatttattggaggagttcactagatttttaccagatacttcatcgtcggccgcc
atacatcattcttccctggacgcacgaagcaatttgctgcgctatgatgaaaggagcggg
acagtgcgtacttctcagcccatgcgtatgaacaagcggtggcgtgatagggacagagtt
agtacgtcccatggcgatcatgatcttagtggtgagcgccctgaattggatggagataaa
ctaatgatgagatcacataaggatcagaggaaacgtgagaaggaaaatcgtgatagaagg
aaccatgacgtggatgatagagagaatgaggatgatatcaacagggacttcagtgtccag
cgtttgtctgataaaaaaaagcctgcccgtaaggttgaagattttaggacagctcctgct
tttggaccatctgatgataagaatgcgttgaaaagcatgtacagccaagaatttcatttc
tgcgaggaggttaaggaaaaactgggcccagatgactaccaggcgttcttgaagtgtctg
catatatacagtacagagataattactagaagtgaactgcaaaattttgttgctgattta
ttggggaagtacccagatctcatggaggggttcagtaaatttcttgaacgttgcgagaat
atttatggatttcttgctggtgttatgaataaaaagtctctattgagcgatggacctttg
ccacgacgagtgaaggcagatgataaagacaaagggcctaagtgtgagatagattcggct
aaagaaaagccaaatgaggattatagctctaaatccatccaagaacttgatctttctaac
tgcaagcgctgcacacctagctaccgacttttacctgatgattatcccatacctacggca
agccaacgatcagagattggtgaacgagtgctgaatgatcattgggtctctgtgacctca
ggaagcgaggattactcctttaaacacatgcgtcgaaatcaatatgaggaaagcctattt
aaatgtgaagatgacagattcgagttggacatgttgttggagtctgtgagctctactgcc
aaaaaggtggaagaactcttggacagtgtaaatggtagcagcattactaaagatgcccct
attcacatagaagagcactttacacctcttaatctaaggtgcattgagcgtctctatggt
gatcatggtttggacgttatggatatactgcgtaaaaatcctgctcttgcattgcctgtc
atccttactcgcctcaagcagaaacaagaagaatggaccaagtgtcgagcagatttcaac
aaggtttgggctgaaatttacgccaagaatcactttaagtcacttgatcaccggagtttc
tatttcaaacaacaagattccaaaaacctgagcaccaagtccttggttgcagatatcaga
gaacttaaagagagtatgcaaaaagaggatgacatggttttggcagttgccgctggaaac
aaaagatctttggttcctcatctcaaatttgagtattctgaccgtgacatccatgaagac
atatataaattaataaaattttcatgtgaggaggttgtgacaactaaagagcagctgaac
aaagtcatgaggctttggactacctttttagagcctatactaggagttacatcacatact
catgatggtgaatatgttaaagctagacaactgtcaggaagagatggtatgaaagcagaa
atggttgaaagtcctcttgttgacggtgctactatcaatgggaaaaagccaagattggtt
gttgatggggtagaaagttcaagagatgcgagaaccaatgctacaactaaagagcagaca
ggtaaaaaagggtcatcttctaatgctcagtcaaacatactgaatgatgctagtgtggga
tatagtgcattggctcaaaatgttgtacaaagccaccatggtagaaacaacgtggaagca
gcgttaggtcctctatcaattccgccggggatgcgtaatggtgatgctcaggagcccaag
tcctctaccgatgctgtccagccacaatccaaggctgctgatactttagccggtatgaca
actgaagcctccactctgatttctaaagcaagtcgacatcttgagaaaaccgttagtcag
tctgaagttgacaaagaagagggtgaaatgccacctaaggctaaatatagtatcaaaaac
cagcaaaatcgagatgacattattgaaaatggtggtctagaggatgaagtcgatgccgaa
aatgaggacagtgaaaatgcttctgagggaggtgatgatttatcagtcgatgaatctgct
ggggatgagtgttctagggaagagcatgaagaagaggaagatgttgaacatgatgagctt
gaaggtaaagctgagagtgaaggggaagctgaagtgcatcatttatgtggggatgtaggg
tcattgaaattatcagagagtttcttatcggctaaaccgctttcaaagtataactctttg
gcttcacgcgatgctgacaagagtgattttcgagtcttctacggaaatgatgacttctat
gctctttttaggcttcaccggatgctatatgaaaggatacttacagcgaaaaccaactca
acatgttctgaatcaaaatggaaaaactcaaaagattcaaaccatttggatccctatgcc
agtttcatgacggcgctgtataatttgcttgatggtttgtctgacaacgcaaagtttgag
gatgactgccgcgctattattgggaaccagtcatatgtgttatttacattggataagttg
atttataaacttgttaaacagcttcaagctatcgcaactgatgagacagacaataagctt
ctgcaactatatgagtatgaaagatcaagaagaccttcaaagtttcttgattcagtttat
cacgaaaatgctcgtgttatactccatgaggacaacatatatcgagtcgagtttgcttct
tcgcctgaccgcatgtcaatgcagctgatggatgacgaaaatgaaaagcctgagatggtt
gcagtatctttagatcctaattttgcagcttatctctacaacgattttttctctgttgtc
tccagaagtagagagcctaagggaatcatgttgcaaaggaacaaaaaactatatgctgac
ctggatgaatattcggcctcgtcgaaagctgtgaagggtgttcatttatctaatggtctg
gaatgtaaagtatcttgcagttcatctaagatctcctatgttctcgatacagaagatttc
tttttccgaacaaagagagagagaaaaagtttatccgttgacgtttccaggaaactcaac
caggctcgtggacatcgatttatcaggtttttgtccgttgcatcccaatga
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