Silene latifolia (white campion): 141612477
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Entry
141612477 CDS
T11116
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03420
Nucleotide excision repair
slaf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141612477
09124 Replication and repair
03420 Nucleotide excision repair
141612477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
slaf03051
]
141612477
03400 DNA repair and recombination proteins [BR:
slaf03400
]
141612477
Proteasome [BR:
slaf03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
141612477
DNA repair and recombination proteins [BR:
slaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
141612477
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NCBI-GeneID:
141612477
NCBI-ProteinID:
XP_074287370
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Position
11:complement(207247129..207253652)
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AA seq
386 aa
AA seq
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MKISIKTLKGINFDIQVNPCDTIVDVKKQIENVQGAEAYPVDKQVLIHQGKVLKDATTLE
ENNVVENSFLVIMLSKAKAAAGGSSGTPAAQAQTQTSTSPVPVPTSTAPQAQPQTDTESV
AAPATAPPSGEANVYGQAASNLVAGSGLDTTIQQILDMGGGSWDRDTVVRALRAAFNNPE
RAIEYLYSGIPEQAEVPPVARAPAPSPAGGQAADLPAQVPQVALPSGGPNASPLDLFPQG
LPNVGSNAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHVMRLIQEHQED
FLRLMNEPVEGGEGNAAAQLASAMPPTLSVTPEEREAIERLEAMGFRRATVLQVYFACDK
DETMAANYLLDHIEEFANEDDEGGLS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagatctccattaaaactctcaaaggcatcaatttcgacatccaagttaacccttgc
gacactattgtagatgtgaagaaacaaatagagaatgtacagggtgcagaggcgtatcca
gttgataaacaggtgctcatccatcagggtaaggttcttaaggatgccacaacactggaa
gagaataatgttgtcgagaacagcttcctagttattatgttgagtaaggcgaaggctgca
gctggaggttcatctggaacacctgctgcccaggcccagactcagacttctacatcccca
gttcctgtgccaacatcaactgctccacaagctcagccacagactgatactgaatctgtt
gctgcgcctgcaactgcccctccttctggtgaagcaaatgtctatggtcaagctgcatca
aatttagttgcgggaagtggcttggatactacaattcagcagattttagatatgggtggt
ggaagctgggatagggatacagttgttcgtgcattacgtgctgcttttaacaatcctgag
agggcgattgaatatctatattctggaatacccgaacaagctgaagttcctccagttgct
cgagcgcctgctccttctcctgctggtggacaggctgcagatcttccagctcaggttcct
caagtagctctaccatcaggtggtcccaatgccagtcctttggaccttttcccacagggc
cttcccaatgtgggatcaaatgctggcgctggctcgttagatttccttcgcaacagtcaa
cagttccaagccttgcgagctatggttcaagccaatccccagatcttgcagcctatgctt
caagaactaggaaagcagaacccacatgtgatgaggcttattcaagagcaccaagaagat
tttctgcgcttgatgaacgaacctgttgaaggaggtgaaggtaatgcagctgcccaatta
gcatctgcaatgccaccaactttgagcgttactccggaggagcgcgaagccattgagcgt
cttgaggctatgggcttcagacgggccactgttttgcaagtgtattttgcatgcgacaag
gatgagacgatggctgcaaactacctcttagatcacatagaagagtttgcgaatgaggat
gatgaaggcggtctctcgtga
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