KEGG   Silene latifolia (white campion): 141613181
Entry
141613181         CDS       T11116                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03018  RNA degradation
slaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141613181
  09123 Folding, sorting and degradation
   03018 RNA degradation
    141613181
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slaf03019]
    141613181
   03041 Spliceosome [BR:slaf03041]
    141613181
Messenger RNA biogenesis [BR:slaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     141613181
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     141613181
Spliceosome [BR:slaf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    141613181
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 141613181
NCBI-ProteinID: XP_074288023
LinkDB
Position
1:183573461..183576994
AA seq 98 aa
MSAGTGLEPLVDQLISVITNDGRNIVGYLKGFDQATNIILDESHERVFSTKEGVQQIVLG
LYIIRGDNICIIGELDEELDAELGLSELRGLPLKPVIH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtctgctggaactggacttgaaccgcttgtggatcagttgatatcagttataacaaat
gatggccgcaatatagtggggtacctgaagggttttgatcaggcaacaaacattattctg
gatgaatcacacgagagggttttctctaccaaggagggtgtccaacaaattgtattgggt
ttgtacatcataagaggcgataacatctgtataattggggagctagatgaagagctggat
gctgagcttgggttatctgaactgagaggccttcctctgaagcctgttatccactag

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