Silene latifolia (white campion): 141613362
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Entry
141613362 CDS
T11116
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
141613362
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slaf01007
]
141613362
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaf03016
]
141613362
Enzymes [BR:
slaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
141613362
Amino acid related enzymes [BR:
slaf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
141613362
Transfer RNA biogenesis [BR:
slaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
141613362
Prokaryotic type
141613362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
FlxA
DUF1543
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
141613362
NCBI-ProteinID:
XP_074288197
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Position
1:186344719..186352832
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AA seq
1121 aa
AA seq
DB search
MVIKYFLTNPYNRMIRILPFNKSVYFFPWFIAHNLNPTHSSPPHSSSRRYATQSGAQLPS
KMSEIGENAISLSAEELERKKKKEEKAKEKELKKQKAALKAEAAKQQAQQASNASKKAER
KNVKKTEDEDPSSFLDPETSLGEKKRLSPVMAKQYSPAAVEKSWYEWWEKSSYFVADSSS
SKPPFVIVLPPPNVTGALHIGHALTSSIEDTIIRWRRMSGYNTLWVPGMDHAGIATQVVV
EKKIMRERKLTRHDLGRENFVSEVWKWKDEYGGKILKQQRQLGATLDWSRECFTMDEQRS
KAVTEGFVRLYDEGLIYRDLRLVNWDCVLRTAISDIEVDYLDLKGRTMLKVPGYENTVEF
GVLTSFAYPLEGGLEEIVVATTRVETMLGDTAIAVHPDDPRYKHLHNKAAIHPFSGRRIP
IVCDATLVDPNFGTGAVKITPAHDPNDFDVGKRHGLEFINIFTDDGKINTNGGPEFAGML
RFDARVSITKALEEKGLYKGVKDNEMRLGVCSRSNDVVEPLIKPQWYVNCSSMAKDALNA
VLDTENRKIEIIPKQYEAEWKRWLENIRDWCISRQLWWGHRVPAWYVTLEDDKLKELGAY
SDHWVVCRSVEDAQAEAQRRFFGKKFQIAQDPDVLDTWFSAGIFPLSVLGWPDQTVDLKA
FYPTSALETGHDILFFWVARMVMLCSKLGGDVPFRKIYLHPMIRDAHGRKMSKSLGNVVD
PLEVINGISLEGLHKRLEEGNLDVGEVAKAKEGQKKDFPNGIPECGADALRFALVSYTAQ
SDKINLDIQRVVGYRQWCNKLWNAIRFALTKLGDNYVPPTSINPSVMPFSCQWILSVLNK
AVGKTVLSLESYEFADAASAVYFWWQSQLCDVFIEVIKPYFSGNDESLASARDSARATLW
VCLDTGLRLLHPFMPFVTEELWQRLPQPKDTVKKESIVISEYPSAIKSWTNESVEREMEL
IEAAVKSLRSLKSVLPPKERNERRQAFALCRSEGVAEVIRCHELDILTLVGLSSLEVLNE
GDAAPLGCSVDVVNENISVYLKVKGMINAEVELQKLRKKMEETKRQKDTLEKMMGASGYK
EKVRAQIHEENVAKLTKLMQEILSLEEASQHLESDIALENN
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggtaattaaatacttcctaacaaacccgtataaccgtatgattcgtatccttccattt
aacaaatccgtttacttcttcccctggtttattgctcacaacctaaaccctacacactca
tcaccaccgcattcgtcctcccgccgttacgctactcaatccggagctcagttaccgtcg
aaaatgtcagaaattggggaaaatgcaatctcactttccgccgaagagctcgaacggaaa
aagaagaaggaagaaaaggcaaaagaaaaagaattgaagaagcagaaggctgcactcaaa
gcagaagctgcgaaacaacaggctcaacaagcatcgaacgcctccaaaaaggcagagagg
aagaatgtgaagaaaactgaagatgaggatccgtctagtttcctagatcctgaaacctca
cttggggagaagaagcgactttcccctgtcatggcaaagcagtactctcctgctgctgtg
gaaaaatcgtggtatgaatggtgggaaaaatcatcatatttcgtggctgattcaagtagc
tcaaaaccaccctttgtaattgtgcttccccctccaaacgtgactggtgcccttcacatt
ggccacgctttgactagctctatcgaggatacaattattcgttggcgaagaatgtccgga
tataatacactctgggttcccggcatggatcatgccgggatagcaacccaggtggttgtt
gagaagaaaattatgcgcgagcgaaaactgacaagacacgatcttggtcgagaaaatttt
gtgtccgaggtgtggaagtggaaagatgaatatggtggcaaaatcttgaagcagcagcgt
caacttggcgcaaccctcgattggtctagagagtgcttcacaatggatgaacaacgatca
aaggcagtgacggaagggtttgtgagactgtacgatgagggtcttatctacagagatctc
cgcttagtaaactgggactgtgtattgagaactgcgatatctgatattgaggtggattat
ttggatctgaaaggacggacaatgttaaaggttcctggatatgagaatacggtggagttc
ggtgtcttgacatcctttgcatatccattagagggaggcctggaggagattgttgttgcc
actactagagtggaaactatgcttggtgatacagcaattgctgtgcatccagatgatccc
aggtacaagcatctgcacaacaaagctgccatccatccttttagtggaaggaggattcct
attgtttgcgatgcaacacttgttgatcctaattttggtactggtgccgtgaagataaca
cctgcccatgatcctaacgattttgacgttgggaaacgtcatgggctggagttcattaac
atctttactgatgatggaaaaatcaacaccaatgggggtccagagtttgcaggaatgctg
cgttttgatgcccgtgtatcaattacgaaagccttggaagaaaagggactgtataaaggt
gtcaaagacaatgagatgcgtcttggtgtttgctcgaggagtaatgatgttgtggaacca
ctgattaagcctcagtggtatgtcaactgcagtagcatggcaaaagatgcgcttaatgct
gttctggatactgaaaatagaaaaattgaaataattccaaaacagtatgaagctgagtgg
aagagatggcttgaaaacatcagagactggtgtatttcaaggcagctttggtggggtcat
cgtgtgcctgcttggtacgtgaccttggaggatgacaaactgaaggagttgggtgcttat
agtgatcattgggtggtctgtcgaagtgttgaagatgcacaggcagaggctcaaagaaga
ttttttgggaagaagtttcagatcgctcaagatcccgatgtgctggacacatggttctca
gctggcattttcccactttctgttttgggctggccagaccagacagttgatttgaaggct
ttctatccaacttctgctcttgaaactggacacgacatcctctttttctgggttgctcgg
atggtgatgttatgcagtaaacttggaggagatgtgccatttagaaagatttatttgcat
cctatgattcgcgatgcccatggacgcaaaatgtccaaatccttaggaaatgttgttgat
ccacttgaggtgattaacgggatatctctggaaggtcttcataagaggcttgaggaaggg
aacttagatgttggtgaggttgccaaggccaaagaaggccaaaagaaggactttcctaat
ggaatcccagaatgtggtgctgatgctttacgttttgccctggtttcttatacagctcag
tctgataaaattaacttggatattcaaagggtggttgggtatcgtcaatggtgcaataag
ctttggaatgctattaggtttgctttgaccaaacttggagataattacgtccctcccaca
agtataaatcctagtgtcatgccatttagttgccagtggatattgtctgtcctaaacaaa
gctgtcggcaaaactgtattgtctctggagtcatatgagttcgctgatgcagccagtgca
gtgtacttttggtggcaatcccagctttgtgatgtttttattgaagtaattaaaccgtat
ttttctggaaatgacgagtcacttgcatctgcgagagattctgcccgggcaacactctgg
gtgtgtcttgatactgggcttcgtctcctgcatccattcatgccgtttgtcacagaagag
ttgtggcagcgacttccccagccaaaagatactgtaaagaaagaatcaatcgtgattagt
gagtatccttctgctataaagtcctggaccaatgaaagtgtagagcgggagatggagctt
attgaggctgctgtcaaatctcttaggtctcttaagtcagtattgcctcccaaagaaagg
aatgaaaggagacaagcttttgctctttgccgaagtgaaggggttgcagaagtcattcga
tgtcatgagttggacattttgactcttgttggtttgtcctcattggaggttctgaatgaa
ggagatgcggcccctctaggatgttcagtagatgttgtgaatgaaaacatctccgtttat
ctgaaggttaaaggaatgataaatgcagaagtagagttgcagaagctaaggaagaagatg
gaggaaacaaaacgacaaaaagacacattggaaaaaatgatgggcgcttcgggatacaaa
gaaaaggttcgagctcaaattcatgaagaaaatgtggcaaagctgacgaagcttatgcaa
gagatcctgtcacttgaagaagcaagtcagcaccttgaaagcgatattgctcttgagaat
aactag
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