Silene latifolia (white campion): 141613435
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Entry
141613435 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141613435
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141613435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slaf03000
]
141613435
03021 Transcription machinery [BR:
slaf03021
]
141613435
Transcription factors [BR:
slaf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
141613435
Transcription machinery [BR:
slaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
141613435
RNA polymerase III system
TFIIIB
141613435
RNA polymerase I system
SL1/TIF-1B
141613435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
141613435
NCBI-ProteinID:
XP_074288293
LinkDB
All DBs
Position
1:complement(180402311..180403218)
Genome browser
AA seq
197 aa
AA seq
DB search
MEVEGMIQEISKHPSEIIPTIQNVVSTVNLGCKLDLTVIALHARNAEYNHKRFSAVIMRI
REPRTTALIFASGKVVCTGAKSEAASKLAARKFARIVQKLGFPVDFIDFKIQNIVGSCDV
KFPIKLELLKEFHRSFAKYEPELFPGMIFRMVEPKIVLLIFVSGKVVLTGAQHREQIYAG
FRNIFPLLNEYKKKTST
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgaaggaatgattcaagaaatctcaaagcatccatcagaaatcatccctaca
atccaaaacgtggtctcaacagttaacttggggtgcaagttagacctaacagtaatcgca
ctccatgcacgtaacgcagaatacaaccacaagcgattctctgcagtgataatgcgaata
agggagcctagaacaacggcactaatctttgcatcagggaaagtggtatgcacgggtgcg
aaaagcgaagctgcatcgaaactagctgctcgtaagtttgctcgaatcgttcaaaagttg
ggatttccagtggattttattgatttcaagattcagaatatagtgggttcttgtgatgtg
aaattcccaattaagttggaattgcttaaagaatttcaccgttcgtttgcgaaatatgag
ccggaattgtttccagggatgatttttcgaatggtggagcccaagattgtgttgcttata
ttcgtttctgggaaggttgtgcttactggtgctcaacatagagaacagatttatgctggc
tttcggaatatttttcccttgttgaatgaatacaagaagaaaacatccacttaa
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