Silene latifolia (white campion): 141613481
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Entry
141613481 CDS
T11116
Name
(RefSeq) squalene synthase 1-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00100
Steroid biosynthesis
slaf00909
Sesquiterpenoid and triterpenoid biosynthesis
slaf01100
Metabolic pathways
slaf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
141613481
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
141613481
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
slaf01006
]
141613481
Enzymes [BR:
slaf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
141613481
Prenyltransferases [BR:
slaf01006
]
Terpene biosynthesis
Squalene/phytoene synthase
141613481
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF3081
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
141613481
NCBI-ProteinID:
XP_074288320
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Position
11:complement(60139843..60142578)
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AA seq
228 aa
AA seq
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MRGGADFVRILLYASIGELIIATPHVEMVGFYQEVIEDITKRMGAGMAKFTCKEVETLDD
YDEYCHYVSGNGSVGLSKFFHNHASEDMASETLSNSMGLLLQSGGKLLISDYCKSSGQPS
SEFTTYIKQRGYDLHDVKEYGQMLKDAGFDDVITEDRTDQFIQVMQREVPTRRVHGCGLV
DGGDVAAGSLLFESFGKLSSRYCQVMRYCELEYGLDFFLASSNRENVG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtggtgcggattttgttcggattttgctgtatgccagcatcggtgagctgatt
atagcaactccacatgttgagatggtgggattttatcaggaggtgattgaggatatcacc
aaaaggatgggtgcgggaatggcaaaattcacctgcaaggaggtggaaacactagacgac
tacgatgaatattgccactatgtttcaggcaatggtagcgtagggttatcaaagtttttc
cataatcatgcctcagaggatatggcctcggagactctttccaattcaatgggcttgctt
ctccagtccggaggcaaacttctgataagtgactactgcaagagcagtggtcagccttct
tccgaatttacaacttatatcaagcagagaggttatgatctccatgatgtgaaggaatac
ggccagatgcttaaagatgctggatttgatgatgttattacggaggataggactgatcag
ttcattcaagttatgcaaagggaggtgccgactagacgagtgcatgggtgcgggctcgta
gatggaggcgatgttgctgctggttcactcttgtttgaatcatttggtaaattgtcaagt
cgatattgtcaagtcatgcggtattgtgaactggagtatggacttgatttcttccttgcc
tcatcaaaccgcgaaaatgtgggatga
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