KEGG   Silene latifolia (white campion): 141613553
Entry
141613553         CDS       T11116                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    141613553
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slaf03019]
    141613553
Messenger RNA biogenesis [BR:slaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     141613553
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     141613553
SSDB
Motif
Pfam: LSM Hfq AAA_24
Other DBs
NCBI-GeneID: 141613553
NCBI-ProteinID: XP_074288394
LinkDB
Position
1:complement(187055778..187058933)
AA seq 128 aa
MSWAGPEDLYLSTSLASYLDRKILVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGEL
YCDIPLGLYVIRGENVVLIGELDSEKDDLPPHMTRVPIPEIRKAQKAERDACDLKGTMRK
RMEFLDMD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcgtgggcaggccctgaagatctctacctttcaacttccttagccagttatcttgat
agaaaaattcttgtcttgctgcgagatggaagaaaacttatgggcacactttgttcattt
gatcaatttgctaatgctgttcttgaaggtgcgtgtgaaagagtcatcgtcggtgaactt
tattgcgatatcccgttaggtctgtatgttatacgtggggagaatgtggtcttgattggt
gaattggactcagagaaggatgatcttccgcctcatatgactcgtgtacccatccctgag
attagaaaggcccaaaaagcagagagggatgcttgtgatcttaaaggaacgatgagaaag
agaatggagttcttggatatggactga

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