Silene latifolia (white campion): 141614730
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Entry
141614730 CDS
T11116
Name
(RefSeq) ABC transporter E family member 2
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slaf03009
]
141614730
Ribosome biogenesis [BR:
slaf03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
141614730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
Fer4_6
AAA
AAA_15
AAA_22
AAA_29
NACHT
AAA_23
LdpA_Fe-S-bd
RsgA_GTPase
nSTAND3
Fer4_2
Rad17
TsaE
Fer4_9
Fer4_10
Fer4_21
SRP54
AAA_5
ORC-CDC6-like
Fer4_4
Fer4_16
Fer4_8
Fer4_17
Fer4_7
UDG-inhib_P56
Motif
Other DBs
NCBI-GeneID:
141614730
NCBI-ProteinID:
XP_074289578
LinkDB
All DBs
Position
1:194070965..194079062
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AA seq
605 aa
AA seq
DB search
MSERLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTTLAKVAFISEELCIGCGI
CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDNIPKAV
QGNVGQVLDQKDERDMKTEMLTDLELNKVLDRNVGDLSGGELQRFAIAVVAMQNAEIYMF
DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLSGFVPTENLRFRDESLTFKVAETPQDNAEEIETYARYKYPAMTKTQG
GFRLRVSEGEFTDSQIVVMLGENGTGKTTFIRMLAGLLKPDDVGDSDVEVPEFNVSYKPQ
KISPKFQHSVRHLLHQKIRDSYMHPQFVSDVMKPLQIEQLMDQEVVNLSGGELQRVALAL
CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFIVEHDFIMATYLADRVIV
YEGSPSVDCTANSPQSLLTGMNLFLSHLDITFRRDPTNYRPRINKLESTKDREQKSAGTY
YYLDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacgtttgacccgtatagccattgtaagctcagatcgttgcaagccaaagaag
tgccgtcaagagtgcaagaagagctgtcctgtggttaagacagggaagctatgtatagag
gtcactacattagcaaaagtcgccttcatttcagaggaactgtgcattggttgcggtatt
tgtgtcaagaaatgcccctttgaagcaattcaaatcatcaatttgcctaaagatttggac
aaggatacaacacatcgctatgggcccaacacattcaagttacacaggttacccgttccg
aggccggggcaagttcttggtttagttggaactaatggtattggaaaatcaactgctctt
aaagtgttagctggaaagctgaagcctaatttggggcgtttcaataaccctcctgactgg
caagagattttaacgtactttcgtgggtctgagctgcaaaactatttcacgcgcatattg
gaagataatttgaaggcaattatcaagccccagtatgtggataacattccaaaggctgtc
cagggcaatgtgggacaggtgttagatcagaaagatgagagagatatgaagactgaaatg
ttgactgatcttgagcttaacaaagttttggatcgtaacgttggggatctttctggtggg
gaactgcagaggtttgctattgctgtggtggctatgcagaatgctgagatatatatgttt
gatgagccttcaagttaccttgatgttaagcaaaggctcaaagctgcacaagttgtcaga
tcattgcttaggcctaacagctacgtcattgttgttgagcacgatcttagtgttctggac
tatctttcggatttcatttgctgtttgtacggtaaaccgggtgcttatggagttgtgacc
cttcccttctctgtgagagaaggtatcaatatatttttgtcaggatttgtgccaactgaa
aatctgcgtttccgtgacgagtcccttacattcaaggttgcagagactccccaagataat
gctgaggagattgagacgtatgctcggtacaaataccctgctatgacaaaaactcagggt
ggatttaggctacgtgtcagtgaaggtgaatttactgattcccagattgttgtgatgttg
ggagaaaatggcacgggaaagacaacttttattcggatgctggctggtttgcttaagccc
gacgacgtgggagattccgatgtggaagtgcctgaatttaatgtttcatacaagccgcaa
aagatcagtccgaaattccaacactccgttagacacctactacatcaaaagattagggac
tcgtatatgcatcctcagtttgtgtcagatgttatgaagcctttgcagattgagcaatta
atggaccaagaagtcgttaatctatctggtggagaattgcagagagttgcgttagctttg
tgtttgggaaagcctgcagatatttatctgatagatgaacctagtgcatatcttgattcc
gagcagcgtattgtagcttcaaaggttataaagaggtttatactccatgctaagaagact
gcctttatcgttgagcacgactttattatggcgacatatctggcggacagagtcattgtt
tatgaggggtcaccttctgtggactgtactgcaaactccccccagtctttgttaactgga
atgaatcttttcctatctcatctggatatcacatttagaagggacccgaccaactaccgc
ccaaggatcaacaaattggaatccacaaaggacagagagcagaaatcagctggaacttac
tattacctggatgattga
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