Silene latifolia (white campion): 141615010
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Entry
141615010 CDS
T11116
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
141615010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slaf04040
]
141615010
Ion channels [BR:
slaf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
141615010
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
141615010
NCBI-ProteinID:
XP_074289721
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All DBs
Position
11:complement(105313428..105318795)
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AA seq
709 aa
AA seq
DB search
MPSFSIPRFHPPRVLQSVFGNPDKNKSSNSNRNRNEEESTSSRSVSLNTSATIECYACTQ
VGVPAFHSTSCDQAGHPEWEAFAGSSLYPHRRPTTEGLSRRKKRRPEGILDPRSEAVRKW
NRVILLARSFALAVDPVFFYTLSIGRGGSCLYMDGLLALVVMLIRTCVDAVHLWHMWLQF
RLAYVSRESLVVGCGKLVWDARAIAFHYLRSLNGFWFDLFVILPIPQVVFWLLVPTLLKQ
DQIRFLVTILVLIFLFQFLPKVYHSIALMRRMQKVTGYIFGTIWWGFGLNLIAYLIASHV
VGGCWYVLAIQRVAACLAQQCKDRNCNVSLSCAKGPCYQFFRKADTKERCVTNSTPTQSS
LCLDDNGPFSYGIYGQALPVLSSNTIVIKIFYPISWGLFQLSSFGNNLDPTCQWAEVLFC
MGLVLGGLMLFTLLVGNIQVFLHTMKARGRKLQLRCRDMEWWMRRRQLPSRLRHRVAHYE
RQNWQTTGGVDEMELIKDLPDGLRRDIKRYLCLDLLKRVPLFDCLDDLILDNICDRLKPL
IYCKDEKILREGDPVQRMIFLARGRIKSNQKLSKGLIATDVLEAGAFLGDELLSWCLRRP
FVHRLPSSSATFVCLESTEAFGLDAYDLRYITDHFRYKFANDSLKRTLRYHSSNWRTWAA
VNIQFAWRRYVKRTKDSVSHMTSENGNAEKRLLKFAAMFMSFRPHDHLD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgccctccttttctattccccgctttcatcctcccagagtactgcagagtgtgttcgga
aatcccgataagaacaagagcagtaacagcaacaggaacaggaacgaggaagagagcaca
agcagcagatcagtatcattaaatacaagtgcaacaatagaatgctatgcatgcacacag
gttggggtcccagccttccactccaccagctgcgaccaggcgggacaccctgaatgggaa
gccttcgccgggtcatccctctacccgcaccgacgacccaccaccgaaggcttatcccgc
cgtaagaagcgacgtccggaagggattctggaccccagaagcgaagccgtcagaaaatgg
aacagggtcatactgctagcacgtagcttcgccttggcagttgatcctgttttcttctat
acattgtcgattgggagaggtggttcctgtctttacatggacgggttgttagcccttgtt
gtaatgcttattcgtacctgtgtggatgctgttcacctttggcacatgtggcttcagttt
cggcttgcttacgtgtctagagagtccttggtagtaggatgtggtaaactggtgtgggac
gcacgtgccatagcctttcattatctgcgttctctgaatggcttctggtttgatcttttc
gttatacttcctattcctcaggttgtcttctggttactcgtgcctacattactcaaacaa
gatcagataaggtttctagtgacaatactcgtgcttatttttctgtttcaattcctccct
aaagtatatcacagcatagccttaatgagaagaatgcaaaaggttactggatacatattt
ggaacaatatggtggggttttggtctcaatctcattgcttacttgatagcatctcatgtg
gttggaggatgttggtatgttcttgcgatacaacgggtcgcagcatgccttgctcaacag
tgtaaagacaggaattgcaacgtgtctttgtcgtgtgcaaagggtccttgttaccaattt
ttccgaaaagcagacactaaagaaagatgtgtcaccaactcgacgcctacccaaagctcg
ttgtgcttggatgataatggtcctttcagttatggcatctatggtcaagctcttcctgtc
ctttccagtaataccatcgttattaagatcttttatcctatctcttggggtttgttccag
ctcagctcttttggcaataatcttgatccaacatgtcaatgggcagaggtgttgttctgc
atgggccttgtgcttggtggcttaatgcttttcaccttattggttggaaatattcaggtg
tttcttcatactatgaaggcgaggggaagaaaactgcagttgagatgtcgggacatggaa
tggtggatgaggcggagacaattaccttctcgtctgcgacacagagttgctcattatgaa
cgccagaactggcagaccactggcggggtcgacgagatggagctgatcaaagacttgcct
gacggtcttaggagagacatcaaacgctatctttgccttgatctgcttaaaagggttcct
ctgtttgattgtttggatgatcttatacttgacaacatctgtgacagactcaaaccactg
atctactgcaaagatgagaagattctgagggaaggagaccccgtgcaaaggatgatattc
ttagctcgtggccgaatcaaaagcaaccaaaaacttagcaaaggattgatcgcaacagat
gttcttgaggcgggtgcgtttttaggtgatgagcttttgtcttggtgccttaggagaccg
tttgtccatcgtcttccatcgtcctcagcgacattcgtttgtctggaatcaacggaagca
tttggtctggacgcatatgacctgcggtacattaccgaccatttccggtacaaatttgca
aatgacagcctgaagcgaacgttgaggtaccattcttcgaactggaggacctgggcagca
gttaacatacagtttgcttggcgacgttatgtgaagagaactaaagattcagtgagtcat
atgacatccgagaatggtaatgctgagaaacggctacttaagtttgctgctatgtttatg
tcctttaggccacatgatcatctggactag
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