Silene latifolia (white campion): 141615312
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Entry
141615312 CDS
T11116
Name
(RefSeq) PHD finger protein MALE STERILITY 1
KO
K26271
PHD finger protein MS1/MMD1
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slaf03000
]
141615312
Transcription factors [BR:
slaf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
141615312
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GFIT
Motif
Pfam:
PHD
PHD_5
PHD_2
Tli4_C
Motif
Other DBs
NCBI-GeneID:
141615312
NCBI-ProteinID:
XP_074289822
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Position
1:complement(195151755..195154903)
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AA seq
647 aa
AA seq
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MSQLEYLHGCNNKRRKRSSADQRVFRFKSFCEPGYPAEFNGPFGKNVRALLEFGHMENNQ
NSNNGMISWSFQLEVHRHRPDHRVFLFIIEEPIEASICRYCKHCRYIGWGQHMICNMKYH
FVVPSKETAAIASTCLSCQNNYCRDGTILAARCGSNSCSLVELEGHTLHGVFHCNGFGHL
LCVNGLEMGSDLSGHQIMDFWDRICTSLRARKVSLTDVSQKKSMELRLLHGLAYGGPWFA
RWEYKFGRGSFGVTETMYQKSIHAIQNIPLCLLFHHLAPLDNYLPIIFSRYQALSEHSLI
TLSDLFYFMLELRSRLPKEASPADIFNPKILLETSCRWSPKRVEMATQVIVEALKRAELK
WVSRQEVRDAARAYIGDTGLLDFVLKSLGNHVVGKYLVRRSLNPVTKVLEYCLEDVSVSH
ENLMLVTRVQLAKDILYLYKSTLRERKPPMAGPSSTISIASRVIQDSKHLVKEFGSYHQN
LPPKNKFGSDNELIDVFCALQLKDKQLMLPYELVQVKGTMNIAEFKMLVEKWFKDMYLGL
NGIVIRSIVNLNANDNDFVSGLIEEGKDVVLEVGICHDIYENSQNQGHGFIECACGTKED
DGERMVACDICEVWQHTRCVRIPNNEEVPRIFLCDRCEQDIVLSPLI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaactcgagtacttgcatggatgcaataacaagaggaggaagagatcgtctgct
gatcaacgcgtttttagattcaagtcattttgtgagcctggttacccggctgagttcaat
ggaccgttcgggaaaaatgtccgagccttacttgagttcggtcatatggagaataatcag
aacagtaataatgggatgataagctggtcttttcagcttgaagttcatcggcatagacct
gatcaccgcgtctttcttttcattattgaagaaccaattgaagcttcaatatgccgttac
tgcaaacactgtcgctatattggttggggacaacatatgatttgtaacatgaagtatcac
ttcgtcgtgccttcaaaagaaacagctgcaatagcatcaacctgtttaagctgccaaaat
aattactgtcgcgatgggacgattttggcagcaagatgtggaagtaactcctgcagcttg
gtggaacttgagggtcatacgctccatggagtgttccattgcaatgggtttggacatttg
ctttgtgtcaatggccttgaaatgggatccgacttatctggccaccagatcatggatttc
tgggaccgaatctgcactagcttgcgcgcaaggaaagtgagtctaactgatgtatcccaa
aagaaaagcatggagttgagactactacatgggttggcatacggaggaccctggtttgca
cgttgggagtataagttcgggcgaggaagcttcggagtcacagaaacaatgtaccaaaaa
tccatccatgccatacaaaacatcccgctttgccttctctttcatcacctggcccctttg
gacaattaccttccaatcattttttcacgataccaagccttgtccgaacactccttgatc
accttaagcgaccttttctacttcatgctagagctccggtctcgccttcctaaagaagcc
agccccgccgacattttcaacccaaagatccttctagagacttcctgtaggtggtctcct
aaacgagttgagatggccacccaagtcattgtggaagccttgaaacgggctgagctcaaa
tgggtgtcaaggcaagaagtccgcgatgctgcccgggcctacattggggatacaggcctc
ttagacttcgtcctgaagtcgcttggtaaccatgttgtcggaaaataccttgttcgtcgc
agcctaaacccggtcacaaaagttctggaatactgtttggaagatgtatcagttagccat
gaaaatttgatgctagtcaccagggtgcaattagcaaaggacatactgtatctatacaaa
tcgacgttgagggagcgtaagccgcctatggccgggccaagtagcacaatctcaatagct
agcagggttattcaagacagcaaacatcttgttaaagaattcggttcttatcatcaaaat
cttccaccaaagaacaaattcgggtccgacaatgaactaattgatgtattttgtgcctta
cagttgaaagacaaacaacttatgctgccatatgaactagtccaggtaaaaggaaccatg
aatattgcagaatttaagatgctggttgaaaagtggtttaaggacatgtatctcggatta
aacgggatagttatccgatcaattgtgaatttaaatgctaacgataatgactttgtctcg
ggtttgattgaagaggggaaagacgtggttctcgaggttggaatttgtcatgacatttat
gaaaacagtcaaaaccaagggcatggattcatagaatgtgcttgtggaacaaaggaagat
gatggagaaagaatggtagcttgcgacatttgtgaagtatggcagcatactcggtgtgtg
cgtattccaaacaacgaagaggttcctcgtatatttctctgcgatcgttgtgagcaagat
attgtgttgtctcctttgatataa
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