Silene latifolia (white campion): 141615378
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Entry
141615378 CDS
T11116
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC141615378
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141615378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slaf03009
]
141615378
Ribosome biogenesis [BR:
slaf03009
]
Eukaryotic type
Pre-60S particles
GTPases
141615378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
SRPRB
RsgA_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
141615378
NCBI-ProteinID:
XP_074289862
LinkDB
All DBs
Position
11:complement(205392571..205395530)
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AA seq
819 aa
AA seq
DB search
MGDFDLDCKKVRNICILAHVDHGKTTLADHLIAGCNGAVHPKQAGKLRFMDYLDEEQRRA
ITMKSSSIGLKFKDYDINLIDSPGHMDFCSEVSTAARLSDGALVLVDSVEGVHIQTHAVL
RQAWVEKLTPCLVLNKIDRLIYELKLTPMEAYNRLLRIVHEVNNIVSGYKSEKYLSDVDS
ILAGPSGVDLGDDENPEFFEDDEEDTFQPQKGNVAFVCALDGWGFCVGEFAEFYAKKFGG
NVTSFKKAFWGPRYFNSKTKMIVSKKAMGGGSNIRPMFVQFVLEPLWQVYQGALEPDGGK
AMLEKVIKNFNLSVLPRELQHKDPKTALQAVFSRWLPLSNTILSMVVRCMPDPIDAQSFR
ISRLLPKREVVDQMAGSEVFARPEHVRRCVETCDSSPEALTVAFVSKIFAVPLNLIPARG
PNDEIIDTSSEEESDECFLAFARIFSGVLTMGQKINVLSALYDPLNVETTQKHLQEAEVR
SLYLMMGQGLKPVASVKTGNVVAIRGLGHHILKSATLSSTKDCWPFSSLMFQVSPMLKVA
IEPSDPADMGALLKGLKLLNRADPFVEVTVSSRGEHILAAAGEVHIERCIKDLREIFAKV
SLELSGFQIATSAGPLCDEPMWGLAFIVEAHIRPSEVQSNELENPQQSLDQYGMFTGQVM
TVVKEACRAAVLQKRPRLVEAMYFCELNTPAEYLGTMYGVLGRRRVRVVKEEMQESSPLF
TVHAYLPVSESFGFADELRNKTSGSSSALLVLSHWEALMEDPFFVPKTEEEIEEFGDGSS
VPQNTARKLIDAVRRRKGLPVEEKVVQHATKQRTLARKV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattttgatttggattgtaagaaagttaggaatatatgcatacttgctcatgtt
gatcatggaaaaactacacttgctgatcatttaattgctggttgtaatggtgctgttcat
ccgaaacaagctggtaaattgaggtttatggattacttagatgaggaacaaaggagagca
attacaatgaaaagttcatcaattggtcttaaatttaaagattatgatattaatttgata
gactcccctggacatatggatttttgtagtgaggtttcgactgctgcgcgattgagtgat
ggtgcattggttttggttgattctgttgagggtgttcatattcagactcatgctgttttg
agacaagcgtgggtcgaaaagcttacgccttgtttagtgcttaataagattgataggttg
atatatgaattgaagcttacccctatggaagcttataataggttgttgaggattgtacat
gaggtgaataatatagtgagtggttataagtcggagaagtatttgtcggatgtggattct
attcttgcaggtccgtctggtgttgatttgggtgatgatgagaatcctgagttttttgag
gatgatgaggaagatacttttcaacctcaaaagggtaacgtggcttttgtttgtgctttg
gatggatggggtttttgtgttggagagtttgccgagttctatgctaaaaagtttggggga
aacgttacttcatttaagaaggccttttggggtcctaggtattttaactcgaagacaaaa
atgattgtgagtaaaaaagctatgggtggaggaagtaatatacggcctatgtttgttcag
tttgtgctagaaccattgtggcaggtataccaaggtgctcttgagcctgatggtggcaag
gctatgttagagaaggtgataaaaaactttaatttgtctgtgcttccacgcgagcttcag
cacaaagatccaaaaactgcgcttcaggctgttttcagccgttggcttcctctctctaat
accattttgtcaatggtggttcgatgtatgccagacccaattgatgcccaatctttccgt
atatcacgtctacttccaaagagagaagttgtggatcaaatggccggctctgaagttttt
gccaggcctgaacatgtgaggcgatgtgttgaaacatgtgattcaagtcctgaggcacta
actgtggcgtttgtctccaaaatttttgctgtccctttgaacttgatccctgcaaggggc
cctaatgatgaaatcatagacacttcttctgaagaagaatccgatgagtgctttcttgct
tttgctagaatttttagcggcgttcttactatggggcagaaaataaatgtgctttctgct
ttgtatgatccattgaatgtggaaaccacgcaaaagcatttacaggaagctgaagtcagg
tcactgtatcttatgatgggtcagggtcttaagccagtggcctcggtgaagaccgggaat
gttgtagctattcgaggacttgggcatcatatcttgaaaagtgcaaccctttcttccaca
aaagactgttggcctttctcgagtttgatgtttcaagtctcacctatgcttaaagttgca
attgagccctccgatccagctgatatgggggcactcttgaagggtttgaaacttttgaat
cgggccgatccatttgtagaggttacagtctcatctagaggagaacatatccttgctgct
gcaggtgaggtccatattgagcgatgcattaaggatttgagggaaatatttgctaaggtg
agcttggagttatctggatttcaaatcgcaacgtcagcaggtcctttgtgcgatgaaccc
atgtggggtctggcatttattgtcgaggctcacattcgcccatctgaagttcagtcaaac
gagctcgaaaacccacaacaatccctggaccaatatgggatgttcactggtcaggtcatg
acagtagttaaggaagcatgtagagctgctgtacttcagaaaagaccacggcttgtggag
gccatgtacttttgcgagctaaacactccagctgagtatctggggaccatgtatggtgtc
ctgggtcgaagaagagttcgagtagtgaaagaagaaatgcaagaaagttcgccattgttt
acagtgcatgcttatttgccagtttctgaaagttttggctttgctgatgaacttaggaat
aagacgtccgggtcttccagtgccttgctcgtcctaagtcattgggaagcgctcatggag
gacccatttttcgtccctaaaaccgaggaagagattgaagaatttggagatggttcgagt
gttcctcagaatactgccagaaagctcattgatgctgtgaggaggaggaaaggactgccg
gttgaggaaaaagtagtgcaacatgcaactaagcagagaaccttggctcgcaaggtgtag
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