KEGG   Silene latifolia (white campion): 141615404
Entry
141615404         CDS       T11116                                 
Name
(RefSeq) notchless protein homolog
  KO
K14855  ribosome assembly protein 4
Organism
slaf  Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slaf03009]
    141615404
Ribosome biogenesis [BR:slaf03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    141615404
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WDR55 EIF3I DSE1_N ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR19_1st ASA1 Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_WDR41 WD40_MABP1-WDR62_1st CFAP251_N Beta-prop_RIG_2nd Beta-prop_DCAF4 NLE Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_WDR75_2nd RMC1_N Tricorn_2nd Beta-prop_HPS5 WD40_RFWD3 WD_LRWD1 TRM82_WD Tricorn_N Beta-prop_Nup120_160 Nbas_N PD40 WDR54 DUF6732
Other DBs
NCBI-GeneID: 141615404
NCBI-ProteinID: XP_074289878
LinkDB
Position
1:195378973..195385426
AA seq 474 aa
MVMEVMEEEERSVICALKDSEGNPLGGPISVPHSIGPKQFQQIINKLLGNEEKLPYAFYI
NDRELVVELGVFLQSINASVENIVQIVYQPQAIFRIAPVYRCSQTLSAHQDAVLVVKFSP
DGRNLASGSGDTNITLWDINTQLPQYTCQGHKNWVLSVEWSPDAKYLASGSKAGEIMCWD
PKTGKSLGGPLVGHRKWITAISWEPLHLQAPCRRFVSASKDGDARIWDVVLKRCVMCLSG
HTLSVTCVKWGGDGVIYTGSQDCTIKVWNTQQGMLIRELKGHGHWVNSLALSTDHVLRTG
AFGHKGTQHESPEEAKEAALEIYNKVRGNAPERLVSGSDDRSLYIWEPLLDKHPKFRLTG
HQQLVNSVGFSPDGQWLASGSFDKSVRLWNPRTGKFVHVFRGHVASVNQICWSADSRFLV
SASKDSTLKVWDIRTLKLKHDLPGHFDEVYAVDWSPNGEKAASGSKDKTTKFFM
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggtaatggaagtgatggaagaagaggaaagaagtgtaatttgtgcgctgaaagactca
gaggggaatccattgggaggccctatcagtgttcctcactcgattggtcccaaacaattt
caacaaatcattaataaactcctcggcaatgaagagaaattgccatatgcgttttatatt
aatgatcgtgaacttgtcgttgaactcggagtttttcttcagtcaatcaatgcttctgtg
gagaatatagtacaaattgtttatcagcctcaagcaatttttcgcattgctccagtttat
cgttgttctcaaacactatctgctcaccaagatgctgtgcttgtggttaaatttagccct
gatggcagaaatttggctagtggttcaggcgacactaatatcacgctctgggacataaat
acccaattaccacagtacacgtgtcaaggacataagaattgggttctttccgttgagtgg
tcacctgatgctaagtatctagccagtggcagcaaggcaggagaaattatgtgctgggat
ccaaaaactggaaagtctcttggtggaccgcttgtggggcacagaaaatggattacagcc
atatcttgggaacccctccaccttcaagctccatgtcgccgatttgtaagtgctagcaaa
gatggtgatgcacgcatctgggatgtagttcttaaaagatgtgtaatgtgcctgagcggc
catacactatctgtaacatgtgtaaaatggggtggagatggagtaatatacactggatct
caagattgtactataaaagtttggaacacacagcaagggatgttgattcgtgagttgaag
gggcatgggcattgggtcaattctctggcactcagcactgatcatgtccttcgtaccgga
gcttttggtcacaagggaacacaacatgaatctcccgaggaagcgaaagaggctgctttg
gagatttataacaaagtgaggggcaacgcaccagagagactagtttcaggctctgatgat
cgttccttgtacatatgggaacctcttctagacaagcacccaaaatttcgattgacgggc
caccaacagcttgtgaacagcgttgggttttcccctgatgggcagtggttggcaagtggt
tcatttgataaatcagtcaggttgtggaaccctcgtacgggaaaatttgttcatgttttt
cgaggtcatgttgcgtctgtgaatcagatctgctggtcagcggatagtcggtttctagtg
agtgcaagcaaggactccactttaaaggtctgggatattaggactctaaaactaaagcat
gacctgccaggccattttgatgaggtttatgctgtggactggagtcctaacggagaaaag
gcggcctctggtagcaaagacaagacaacgaaattttttatgtga

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