Silene latifolia (white campion): 141615404
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Entry
141615404 CDS
T11116
Name
(RefSeq) notchless protein homolog
KO
K14855
ribosome assembly protein 4
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slaf03009
]
141615404
Ribosome biogenesis [BR:
slaf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
141615404
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
EIF3I
DSE1_N
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
ASA1
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
CFAP251_N
Beta-prop_RIG_2nd
Beta-prop_DCAF4
NLE
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_WDR75_2nd
RMC1_N
Tricorn_2nd
Beta-prop_HPS5
WD40_RFWD3
WD_LRWD1
TRM82_WD
Tricorn_N
Beta-prop_Nup120_160
Nbas_N
PD40
WDR54
DUF6732
Motif
Other DBs
NCBI-GeneID:
141615404
NCBI-ProteinID:
XP_074289878
LinkDB
All DBs
Position
1:195378973..195385426
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AA seq
474 aa
AA seq
DB search
MVMEVMEEEERSVICALKDSEGNPLGGPISVPHSIGPKQFQQIINKLLGNEEKLPYAFYI
NDRELVVELGVFLQSINASVENIVQIVYQPQAIFRIAPVYRCSQTLSAHQDAVLVVKFSP
DGRNLASGSGDTNITLWDINTQLPQYTCQGHKNWVLSVEWSPDAKYLASGSKAGEIMCWD
PKTGKSLGGPLVGHRKWITAISWEPLHLQAPCRRFVSASKDGDARIWDVVLKRCVMCLSG
HTLSVTCVKWGGDGVIYTGSQDCTIKVWNTQQGMLIRELKGHGHWVNSLALSTDHVLRTG
AFGHKGTQHESPEEAKEAALEIYNKVRGNAPERLVSGSDDRSLYIWEPLLDKHPKFRLTG
HQQLVNSVGFSPDGQWLASGSFDKSVRLWNPRTGKFVHVFRGHVASVNQICWSADSRFLV
SASKDSTLKVWDIRTLKLKHDLPGHFDEVYAVDWSPNGEKAASGSKDKTTKFFM
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggtaatggaagtgatggaagaagaggaaagaagtgtaatttgtgcgctgaaagactca
gaggggaatccattgggaggccctatcagtgttcctcactcgattggtcccaaacaattt
caacaaatcattaataaactcctcggcaatgaagagaaattgccatatgcgttttatatt
aatgatcgtgaacttgtcgttgaactcggagtttttcttcagtcaatcaatgcttctgtg
gagaatatagtacaaattgtttatcagcctcaagcaatttttcgcattgctccagtttat
cgttgttctcaaacactatctgctcaccaagatgctgtgcttgtggttaaatttagccct
gatggcagaaatttggctagtggttcaggcgacactaatatcacgctctgggacataaat
acccaattaccacagtacacgtgtcaaggacataagaattgggttctttccgttgagtgg
tcacctgatgctaagtatctagccagtggcagcaaggcaggagaaattatgtgctgggat
ccaaaaactggaaagtctcttggtggaccgcttgtggggcacagaaaatggattacagcc
atatcttgggaacccctccaccttcaagctccatgtcgccgatttgtaagtgctagcaaa
gatggtgatgcacgcatctgggatgtagttcttaaaagatgtgtaatgtgcctgagcggc
catacactatctgtaacatgtgtaaaatggggtggagatggagtaatatacactggatct
caagattgtactataaaagtttggaacacacagcaagggatgttgattcgtgagttgaag
gggcatgggcattgggtcaattctctggcactcagcactgatcatgtccttcgtaccgga
gcttttggtcacaagggaacacaacatgaatctcccgaggaagcgaaagaggctgctttg
gagatttataacaaagtgaggggcaacgcaccagagagactagtttcaggctctgatgat
cgttccttgtacatatgggaacctcttctagacaagcacccaaaatttcgattgacgggc
caccaacagcttgtgaacagcgttgggttttcccctgatgggcagtggttggcaagtggt
tcatttgataaatcagtcaggttgtggaaccctcgtacgggaaaatttgttcatgttttt
cgaggtcatgttgcgtctgtgaatcagatctgctggtcagcggatagtcggtttctagtg
agtgcaagcaaggactccactttaaaggtctgggatattaggactctaaaactaaagcat
gacctgccaggccattttgatgaggtttatgctgtggactggagtcctaacggagaaaag
gcggcctctggtagcaaagacaagacaacgaaattttttatgtga
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