Silene latifolia (white campion): 141616924
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Entry
141616924 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141616924
KO
K03504
DNA polymerase delta subunit 3
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03030
DNA replication
slaf03410
Base excision repair
slaf03420
Nucleotide excision repair
slaf03430
Mismatch repair
slaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141616924
03410 Base excision repair
141616924
03420 Nucleotide excision repair
141616924
03430 Mismatch repair
141616924
03440 Homologous recombination
141616924
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slaf01009
]
141616924
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slaf03032
]
141616924
03400 DNA repair and recombination proteins [BR:
slaf03400
]
141616924
Protein phosphatases and associated proteins [BR:
slaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141616924
DNA replication proteins [BR:
slaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
141616924
DNA repair and recombination proteins [BR:
slaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
141616924
MMR (mismatch excision repair)
DNA polymerase delta complex
141616924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
DUF4388
Motif
Other DBs
NCBI-GeneID:
141616924
NCBI-ProteinID:
XP_074290187
LinkDB
All DBs
Position
X:291403955..291412354
Genome browser
AA seq
531 aa
AA seq
DB search
MSEFEISGILDEIQALVSDHLQVVSYKWLSRKFLVSSNAAKRLLQDLVEKHEDELEVIYS
VAGWLKGSTTFQSKLVPKPKLEEAKHDFDGNCSVQVYSVQSCIPNDVAAIWNAEFIQTEE
LSKQALTEVNCLSNNRFSGVSNVSVKRNADGVDSLPVTATKAKGADASGQAIGSLANQIS
SIPQPQKKLLHSSPNLGLQSSNTTSTKNVTDKPAARDLQKEVAKDKLPVPLSKQRGHSDK
SPTGGSLANLWGRASSKSNSSKEDKDAAQNNGVPDSADAQICAIENLEAGSSDDNEPDVN
FRRASNGNGGKKRRVVLDDSDEEDFENAVNLGSPDPPKEKLVSELKQKNKTILFEDNILN
NEQKETILIIKDEKVTSSEANNPFKKDFAALDQGKKVSLVSAEEKEVPRRAAVSTSNKNN
TTDRAPGSPKRRKVLKTRIDERGREVTEVVWEGKEEDMNPSNAGKNSNGQTVKTEDNAVV
APVQRAATTKKSPATGNTVPAHAAGKAGGKKGANTKDPKQGNIMSFFKKKV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaattcgaaatctcaggaattcttgatgagattcaagctctcgtatctgatcac
cttcaagtggtttcatacaagtggcttagtcgcaaatttctggtgtcatcaaatgcggct
aagcggttacttcaggacttagtggaaaaacatgaagatgaattagaagtcatatactct
gtggcaggttggttaaaaggctctacaacgttccagtcaaaacttgttcctaaacccaaa
cttgaagaggccaagcatgattttgatggtaattgctcagtccaagtttacagtgttcaa
agttgtattccaaatgacgtagcagctatatggaacgcggagtttattcaaacagaggag
ctctccaagcaggctttaacagaagttaattgtctcagcaataataggttcagtggggtt
tcaaatgtgtctgttaagcgtaatgctgatggtgtagattctttaccagtgacagctacg
aaggctaaaggggccgatgcttctggtcaggctataggtagtttggccaaccaaattagt
tctattccacagcctcagaaaaagctgctacattcaagcccaaatttgggtctgcagtcc
tccaacacgacctctacgaaaaatgtaactgataagcctgctgcgcgtgatctccagaag
gaggtagctaaagataaacttcctgtccctctgtctaaacagagaggtcatagtgacaag
agtccaacaggaggttctttggcaaatttatggggtcgtgcatcttcaaaatcaaactcc
tctaaagaagacaaagatgctgctcaaaacaatggtgttcctgatagtgcagatgctcaa
atttgcgccattgaaaacttagaggctggcagcagtgatgacaatgaaccagatgtcaat
ttccgaagagcttcaaatggtaatggcggtaagaagagaagggtagtacttgatgattct
gatgaagaagattttgagaatgcagtaaatttaggatcacctgatcctccaaaagaaaaa
ttggtttcagaattaaaacaaaagaacaaaacaattttatttgaggataacatattgaac
aatgagcagaaagaaactatactaataataaaagatgagaaagtgacatcttctgaagca
aacaatccctttaagaaggattttgcagctctcgaccaaggcaagaaagtgagtttggtc
tctgcagaagaaaaagaggttcctcggagagcagctgtcagtactagtaataagaacaat
actacagatcgtgctccaggttcacctaaaagaaggaaagtgttgaaaacccgaattgat
gaacgtggaagagaagtgactgaggtggtatgggaaggcaaagaggaggatatgaatccc
agtaatgcagggaagaattctaatggccaaactgtgaagactgaagacaatgcagttgtt
gctcctgttcagagggcggccacgactaaaaagtctccagctaccggaaacactgtgcca
gcccatgcagcaggaaaagctggtggtaagaaaggagcaaatactaaggatcctaagcaa
ggtaatataatgtcgttcttcaagaagaaagtttga
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