Silene latifolia (white campion): 141617342
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Entry
141617342 CDS
T11116
Name
(RefSeq) double-strand break repair protein MRE11-like isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03440
Homologous recombination
slaf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141617342
03450 Non-homologous end-joining
141617342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slaf03032
]
141617342
03400 DNA repair and recombination proteins [BR:
slaf03400
]
141617342
DNA replication proteins [BR:
slaf03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
141617342
DNA repair and recombination proteins [BR:
slaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
141617342
BRCA1-C complex
141617342
NHEJ (non-homologous end-joining)
MRX complex
141617342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
LIME1
PspAA
Motif
Other DBs
NCBI-GeneID:
141617342
NCBI-ProteinID:
XP_074290627
LinkDB
All DBs
Position
X:306418339..306430668
Genome browser
AA seq
718 aa
AA seq
DB search
MNDTLRVLVATDCHLGYMEKDEIRRHDSFESFEEICSIAEKKQVDFVLLGGDLFHENKPS
RSTLVRALEILRRYCLNDRPVQFQVVSDQTLNFPNRFGHVNYEDPHFNVGLPVFTIHGNH
DDPAGVDNLSAVDILSACNLANYFGKMDLGGSGVGQITLYPILIRKGLTSVALYGLGNIR
DERLNRMFQTPHSVQWMRPEAQEGNEISDWFNILVLHQNRIKTNPKNAINEHFLPRFLDF
VVWGHEHECLVDPQEVPGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIP
LHSVRPFEYAEVVLKDIPDVDQNDQNSILEHLDKVVRKLIEKSDKLAAGKSEARLPLVRL
KVDYSGFTTINPQRFGQKYVGKVANPQDILIFSKASRTKSRSEGKIDDSEKFRPEELNQQ
NIEALVAESNLKMEILPVNDLDIALHNFVNKDDKLAFHACVQHTLEETRSKIAGDSDSAD
FEEKDLIVKVEELLEERVKESATRPKGTFTFSAHSGDLKGKGKTGIGSAVSFSDDDEDST
QIVGAKSTARGRKTTTSLGSSRDASQIGKTSTRGRGRGRGKGTSNLKQSTLDMSLGFRRS
QRSASAVASASVQSIADEEENVDSGSNEEGVEHEVQEINDSSGDDGRVESKSRKRAAPRG
RGRGSTQPSKRGRKSEISSLQRMVLGNDDDDDDDYDDMSSRLKKSQAKVTRNYGALRR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatacgttacgagttcttgtggcaacagattgccacctgggctacatggagaag
gatgaaatacggcgtcatgattcatttgagtcttttgaggagatatgctcaatagcagag
aaaaagcaggtggattttgtacttcttggtggagatctctttcacgaaaacaagccatct
aggtcaactttggtgagagctctagagatccttcgtcgatattgtctaaatgatcgtcca
gtacagttccaagttgtcagtgaccagacattaaatttccctaatagatttggtcatgtt
aattatgaggatcctcacttcaacgttggattgccggtgttcacgattcatggcaatcat
gatgatcctgctggtgtggataacctttcagcagttgatattctttcagcctgcaatctt
gctaactactttggtaaaatggatctaggaggctctggcgttggccaaattactctgtat
cctattcttattcggaagggtcttacatcagtagctttgtatggccttggaaatatccga
gatgaaaggctgaacagaatgtttcagactcctcattcagttcagtggatgcgccctgaa
gctcaagaaggaaatgaaatttcggattggtttaacatccttgttcttcatcagaataga
ataaagacaaatccaaaaaatgcgattaatgagcactttttaccacgattccttgatttt
gtagtttggggacatgaacatgaatgcctagttgatccacaggaagttcctggcatgggt
ttccatatcacgcaacctggctcttcggttgccacatcgcttattgatggggagtcaaag
ccaaagcacgtccttctcttggaaattaagggaaaccaataccggccaactaaaataccc
ctgcattcagttaggccatttgaatatgctgaggttgtgctgaaagatatacctgatgtt
gatcaaaatgatcagaattcaattcttgagcatctagacaaagtggtcagaaaattaatt
gagaaatctgacaaattggcggccggtaaatctgaagctaggcttccattggtccgatta
aaggttgactactccgggtttacaactataaatcctcagaggttcggacaaaagtatgtg
gggaaggtggcaaatcctcaggatattctgatattctccaaagcttcacgaacgaaaagt
cgcagtgaaggcaaaatcgacgattctgagaagttccgtcccgaagaattaaatcaacaa
aatatcgaggctttggttgcagagagcaatttgaaaatggagatcctacctgtgaatgat
ttggatatcgcacttcataattttgtcaacaaagatgacaagttagctttccatgcttgt
gtgcaacacacccttgaggaaacacgtagcaaaattgctggagactcagactcggctgac
tttgaagaaaaagacttgattgttaaagttgaagaacttcttgaggaacgtgtcaaagaa
agtgcgacacggccaaaaggaacttttaccttcagtgctcattcaggggatttgaaaggt
aaaggcaaaacaggaataggaagtgcagtatcttttagcgatgacgatgaagattccacc
cagatagttggggcaaaatctacagctcgaggcagaaaaactacaacatctctaggttca
tctcgtgatgcttctcaaattggtaaaacttccacgaggggaaggggaaggggaagaggg
aagggtacttctaatttgaagcaatcaactcttgacatgtccttgggctttcggcgttct
caacgatctgcttcagctgttgcgtcagcgtcagttcagagcattgcagatgaagaagaa
aatgtggattctggttcaaatgaagaaggtgtagaacatgaagtgcaggagattaatgac
agttcgggagatgatggaagggttgaaagtaaaagtcgcaaacgagctgcaccaagagga
aggggtagaggttctacgcagccctctaagaggggtagaaaatcagagatctcttcgctc
caaagaatggtcttgggaaatgatgatgacgacgatgatgattatgatgacatgtcaagt
cgattaaagaagtctcaagcaaaggtcacaagaaactatggggctttaaggagataa
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