Silene latifolia (white campion): 141617386
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Entry
141617386 CDS
T11116
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03015
mRNA surveillance pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141617386
09122 Translation
03015 mRNA surveillance pathway
141617386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141617386
Spliceosome [BR:
slaf03041
]
Complex A
Other components
Complex A specific factors
141617386
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
141617386
NCBI-ProteinID:
XP_074290683
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All DBs
Position
1:200094450..200098155
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AA seq
410 aa
AA seq
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MYGGGDDSAHPPPTGPYGGGGYGGGGDRRGGGYGGGGGYSDNRGGGYQGGDRGSRGGGRG
GSGGGGGGRDGSGRDGDWRCPNPGCGNLNFARRTACNKCGESAPGGAGGGGGNRGGGGGG
GYNRGSSGGYGGDRGGRGRDSGGGGYEGGRGGGRDASGYGNVPQSAPSYGGGGGSNYPPV
PYGENDSAVPPPSSYSGGAGSYPQSYGAPTYGGDAPGGYRGGDRGGQQGGYGGGSRHTGG
GRGDYGGGAPPSSDPPEKVKQCDEKCDDTCDNARIYISNLPPDVTVEELQGLFGNIGTVA
RIKQKRGYKDQWPWSIKLYTDENGKNKGDGVLTYEDPSAAHAAGGFFEGHDLRGYKISVT
MAAKSAPKPPSSGNRGGGRGGYGGGDRRRDNRDGGGPDRHSYSGNRSRPY
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtatggcggcggcgatgattccgctcatcctcctccaactggtccatatggcggcggc
ggctatggaggtggtggagatcgtagaggtggcggctatggcggcggcggcggttactcc
gacaaccgtggcggtggatatcaaggaggggatcgaggtagccgcggtggcggaagaggt
ggaagtggcggaggcggaggcggtcgtgatggaagtggtcgagatggagactggcgttgt
cctaatcctggttgtggaaatttgaactttgcacggcgaactgcttgcaacaaatgtggt
gaatctgcacctggtggtgcaggtggaggtggtggtaatcgtggaggaggaggtggtggt
ggttacaatagaggttctagtggagggtacggtggtgatagaggaggtagaggtagggat
agtggcggtggcggttatgaaggtggaaggggtggaggacgagatgccagtggttatggc
aatgtccctcaatctgcaccttcttatggtggcggcggtggaagcaactatcctcctgtg
ccttatggcgagaatgactcagcagtacccccaccttcaagctattctgggggggctgga
tcctatccacaatcatacggtgctcctacctatggtggtgatgctcctggagggtataga
ggtggtgaccgtggtggtcaacaaggtgggtatggaggtggttcaagacatactggtggt
ggcagaggagattatggtggcggggcaccaccatcttccgatccaccagaaaaggtgaaa
cagtgcgatgaaaaatgtgatgatacttgtgacaatgcaaggatttatatatctaattta
ccacccgatgttactgttgaggagctccaaggtttatttggaaacatcggaactgttgca
agaatcaaacaaaagagaggttacaaggatcagtggccatggagcataaagctttacact
gatgaaaatgggaagaacaagggtgatggcgtgttgacctatgaggacccgtcagcagcc
catgctgctggtggtttttttgaaggtcatgatttgcgagggtataagatcagtgttaca
atggcggcgaagtctgcaccaaaaccaccatcatctggcaatcgaggcggtgggcgaggt
ggttatggaggaggcgatcgtcgtagagacaatagagatggaggtggtccagataggcat
tcttatagtggaaatcgttctcgcccatactaa
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