Silene latifolia (white campion): 141617602
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Entry
141617602 CDS
T11116
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141617602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141617602
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
141617602
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
141617602
NCBI-ProteinID:
XP_074290883
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Position
X:313901857..313906722
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AA seq
394 aa
AA seq
DB search
MDADQGKLFVGGISWETSEEKLKEYFGQYGDVLQANIMRDKTTGRPRGFGFVHFSDPSVL
DRVLQDKHSLDGRSIEAKRATSREEQQNTARTGNNGGRNGGGGGNIRTKKIFVGGLPPSL
TDEGFRQYFEGFGHVTDVVIMFDQNTQRPRGFGFISFDSEDAVDRVLQSTFHDLDGKQVE
VKRALPKDANPGMASRGSGGGSGAGSGNYGYNSSGNQSSYDSRMESNRYMQPQSAGGGFP
SYGSSGYGAAGYGYGPASGGMGYGGYPGYGAPTNAAYGNPNVPSAGYGSGPGGAPRSSWN
AQMASGYGASGYGNSAGPVGQSPTVASGYGSQGYGYGNYGGAPSSNTSGGAGGELQAGYG
SGYADANGHGGYANGAQMGYGGGYGGAQSRQTQQ
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagatcaagggaagttgtttgttggtgggatttcatgggaaacaagtgaggaa
aagttaaaggaatattttggacaatatggtgatgttttgcaagctaatattatgagggat
aagactactggtagacctagaggttttggttttgttcacttttctgatccttctgttctt
gatagagttcttcaggataaacacagtttagatggtagatcgattgaggctaagagagct
acctcaagagaggagcagcagaacactgcgagaactggaaacaatggtggtagaaatgga
ggtggaggcgggaatattagaaccaagaagatatttgtagggggtttacctccttctctt
actgatgaaggtttccgacagtactttgagggctttggccatgtaacagatgtagttata
atgtttgaccagaatactcagaggccccgtggttttggctttatttcttttgacagtgag
gatgcagtagatagggttttacagagtaccttccatgacttggatggtaagcaggttgag
gttaagcgggcgctacccaaggatgcaaatcccggtatggctagccgcggaagtggtggt
gggtctggtgctggtagtggcaattatggttataattctagtggcaatcagagttcttat
gacagtaggatggagtctaatagatacatgcaacctcaaagtgctggaggcgggtttcct
tcctacggttcttctggatatggtgcagctgggtatgggtatgggcctgccagcggtggg
atgggctatggtggatatcctggatatggggctccaactaatgctgcatatggaaacccg
aatgtgccgagtgcaggctatggtagtgggcctggaggtgcaccaaggagctcatggaat
gcccaaatggcatctggttatggagcatctggatatgggaatagtgcaggacccgtgggt
cagtccccaaccgttgcctctggatatggaagtcaaggttatggatatgggaactatggt
ggggctcccagtagcaatacctctggtggggccgggggagagttgcaagcaggatatgga
agtggctatgctgatgccaatggtcatggaggatatgcaaatggggctcaaatgggctac
ggtggcggttatggcggggcccaatcccgtcaaacccagcagtaa
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