Silene latifolia (white campion): 141618045
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Entry
141618045 CDS
T11116
Name
(RefSeq) single-strand DNA endonuclease 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slaf03400
]
141618045
DNA repair and recombination proteins [BR:
slaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
141618045
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
XPG_I_2
Chromo_2
Motif
Other DBs
NCBI-GeneID:
141618045
NCBI-ProteinID:
XP_074291265
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Position
X:322507206..322513442
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AA seq
594 aa
AA seq
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MGVKNLWDILESCKTTLPLHHLQNKRVCIDLSCWMVQLQSVNKSYCATKDKVYLRGLFHR
LRALIALNCSLICVTDGAVPAIKLSTYRRRLNTLNDVTKDDIERQKGTSLRRNMGSEFSC
MIREAKALATALGIPCLDGVEEAEAQCALLNSESLCDGCFTSDSDIFLFGAKTVYRDICL
GEGGYIVCYEMKEIEKKLRLGRRSLIALALLLGSDYSHGVRGFGPETACQVVRSIGEDAV
LRLITSEGLSFLKTLKSSKKNVQSRKSSDKENYSECHVKDTGCQQHLGQDNEALQVIDAY
MKPKCHPADSEPVYRVLAVHAFQRNELQEICAKFFEWPPEKTDEYILPKIAERNLRRFAN
LRSSSSRLGVALPLHEMPVNCPISEVLKHRRIKCVDCFEVSWEDLDGLKSSVVPADLVES
ACPEKIAEFKERKAQEKKQKNKKPRSKKSDEKASLPNVDLKLQNLLLEIESDSNARRENS
LRNSRQDSDSTHSSSVVDLTVSDMFFNEECESKIVNGSEDYQPDPPNVVAMDIVDLLSPS
PEVKLRYVSKCQGNTELVNVIDLSDSDMEISPEHARKARDLRLFLASIREEISQ
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgggggttaaaaacttgtgggatattttagaatcatgcaagacaactttgcctcttcat
catcttcagaacaagagggtgtgcatagacctctcatgttggatggtacaactccaaagt
gtcaacaagtcatactgtgctacgaaagacaaggtttatcttaggggcctctttcaccgt
ctcagggctctcattgctttgaattgtagtcttatctgtgtgactgatggagcagtcccg
gctattaaactttctacgtataggaggcgtttgaatacattgaatgatgttacgaaagat
gacatagagagacaaaagggtacttcacttcgaagaaatatgggttctgaattttcttgt
atgatcagagaggcgaaagctcttgccacagcacttggtattccttgcttagatggggtt
gaggaagctgaggcacagtgcgcactattaaactccgaatcactttgtgatggatgtttc
acttcggattcagatatcttcctttttggtgcaaaaactgtctacagggatatctgtctc
ggagagggaggttatattgtttgctatgaaatgaaagagattgagaagaagcttagactt
ggaaggcgttcgttgattgccctggcccttcttctgggaagtgattattctcacggagtt
cgcggatttggacctgaaacggcttgccaagttgttagatccattggtgaagatgctgtt
cttcgtcttattacatcagaaggattatctttcttgaagacactgaaatcctcgaagaaa
aatgtgcaatctcgaaagagcagtgataaagagaattattcagaatgtcatgtaaaggat
actggctgtcagcagcatttaggacaggacaatgaagctttgcaggttattgatgcatat
atgaagccaaagtgtcatccagccgactcagagcctgtttatagggttcttgctgtacat
gctttccagcgaaatgagcttcaagaaatatgtgccaaattttttgagtggcctccagaa
aagacagatgagtatattcttccaaagattgccgaaagaaatctacgaagatttgccaat
ttacgttcttcttcttcacgattaggagttgcactccctttgcacgagatgcctgtaaac
tgtccaatttcggaagttttgaagcacagaagaattaagtgtgtagactgctttgaagtt
tcctgggaagatttagatggccttaaatcatcagttgtacccgctgatcttgtggagagt
gcatgtcctgagaagattgcagaattcaaggaaagaaaagctcaggaaaagaaacagaag
aataaaaaaccaagatcaaagaaatcagatgagaaagcatccttgcctaatgttgatttg
aaactgcagaacctgttattagaaattgaatccgacagcaatgcaaggcgtgagaattca
ttgcggaatagtaggcaggactccgacagtactcacagtagcagtgtagttgatttaacg
gtttccgacatgtttttcaatgaagaatgtgaaagcaaaattgttaatggcagcgaggat
taccaaccagaccctccaaatgttgtggcaatggacattgttgatctcttaagtccgtct
cctgaagtaaaattgcgatatgtctcgaagtgtcaagggaacacagaactagtaaatgtt
attgatcttagtgattctgatatggagatatcacccgaacatgctaggaaagcgagggat
cttagattgttcctggcaagtattcgggaagagatttctcaataa
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