Silene latifolia (white campion): 141618795
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Entry
141618795 CDS
T11116
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic-like
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
141618795
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slaf01007
]
141618795
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaf03016
]
141618795
Enzymes [BR:
slaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
141618795
Amino acid related enzymes [BR:
slaf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
141618795
Transfer RNA biogenesis [BR:
slaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
141618795
Prokaryotic type
Other AARSs
141618795
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
141618795
NCBI-ProteinID:
XP_074291972
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All DBs
Position
X:333508019..333517111
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AA seq
669 aa
AA seq
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MSLIINQILKQNLKLLSIPLPKPLPLRSFHLTPLPAALLRISSSSSLSLRRLMSTSDVDA
AATAAANLAINDAPEGEPLSKNALKKLAKEKKKEEERLKKEEEKAAKQAAMASTQGPKSQ
AVDEDDMDPTQFFENRLKSLAALKDAGLNPYPHKFFVTMSIPEYIKKYGELDNGAHLENE
QVSLAGRIMNKRSSSSKLFFYDLHWSGVKVQVMADARTSELDEAEFSKFHAGVKRGDIVG
LTGFPGKSKKGELSIFPKSFVVLSHCLHMMPRQKKTGPAAESEKKAEVWVPGKTRNPEMY
VLKDQETRYRQRYLDLMLNGEVREIFKTRARVISYIRRFLDNLDFVEVETPMMNMIAGGA
AARPFVTYHNDLNMRLFMRIAPELYLKELVVGGLERVYEIGKQFRNEGIDLTHNPEFTTC
EFYMAFADYNDLMELTEQMLSGMVKELTGGYVVKYHANGLDKDPITIDFTPPFRRIDMID
ELEKMADLNIPKDLASEEANKYLIDACAKYDVKCPPPQTTTRLLDKLVGHFLEETCVNPG
FIINHPEIMSPLAKWHRSKRGLTERFELFVNKHEVCNAYTELNDPVVQRQRFADQLKDRQ
SGDDEAMALDETFCTALEYGLPPTGGWGLGIDRMTMLLTDSQNIKEVLLFPAMKPQDEPP
TKAASEEQH
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtccctaataataaaccaaatacttaaacaaaacctcaaactcctctcaatcccccta
ccaaaacccttacccttgcgctcttttcacttaacacctctacccgccgcacttcttcgc
atctcttcgtcatcttcgctttctctccgccgtctaatgtcgacatccgacgtcgacgcc
gccgctaccgccgccgcaaacttagcaattaacgatgctcctgaaggcgaacctctcagc
aaaaatgcgctgaagaaattggcaaaggaaaagaagaaggaagaagagcgactcaaaaag
gaagaggagaaggctgcaaagcaggctgccatggcaagcacccaagggccgaagtcccaa
gctgttgatgaggatgatatggaccccacgcaattctttgaaaacaggttgaagtcgctc
gctgctctgaaagatgcgggattaaatccatatccgcacaagttttttgtcacaatgagt
attcctgaatacataaagaaatatggtgaattggacaatggcgctcaccttgaaaatgag
caagtatcactagctggaagaattatgaacaaacgttcatcatcatcaaaacttttcttt
tatgatttgcattggagtggtgtcaaagtccaagtcatggctgatgccaggacctctgaa
ttggacgaagctgaattttcaaagttccacgctggtgtgaaacgtggggatattgttggt
ttaactggattcccaggtaaaagtaagaagggggagttgagtatttttcccaagtctttt
gttgtgttatctcattgtcttcacatgatgccaaggcagaagaaaactggccctgctgcc
gagagtgaaaagaaagctgaagtctgggtccccggaaagacacgtaatccggagatgtat
gttttaaaggatcaggaaactcggtatcgccaacgctacctggatttgatgttaaatggc
gaagttagagaaatattcaagacccgagccagggtaatatcatatataaggagattcctg
gacaatcttgatttcgttgaggtagaaacgcccatgatgaatatgattgctgggggtgca
gctgcacgtccatttgtgacctatcacaatgatctgaatatgaggttattcatgcgtatt
gctcctgagctttatttgaaggagcttgttgttggtgggcttgagcgtgtttatgagatc
ggtaaacaatttaggaatgagggtattgacttgacacataaccctgagttcactacatgt
gagttttatatggcatttgctgattacaacgatttaatggagcttacggagcagatgtta
agtgggatggtgaaggagttgactggtggttatgttgttaaatatcatgcaaatgggcta
gataaggacccaattacaatcgatttcactcctccatttagacgtatagacatgatagat
gagttagagaaaatggctgacctgaatattccaaaggatctagctagcgaagaagcaaat
aaatatttgatagatgcttgtgcgaagtatgatgtgaaatgcccgccaccacagacaaca
actcgtttattagataaactggtgggacactttttggaggaaacttgtgtcaatcctggt
tttatcattaatcatccagaaataatgagtccattagccaagtggcacagatcaaagcgt
ggactcactgaacgttttgaattgtttgtgaacaagcatgaggtttgtaatgcatacact
gaactaaatgatcctgtagtacagcgccagagatttgctgatcaactgaaggaccgacaa
tctggtgatgatgaagctatggctctggacgagacattttgcacagcacttgagtatggg
ctgcctcctactggtgggtggggacttggtattgacagaatgaccatgttgctcacagat
tcccaaaacataaaggaagtcctcctctttcccgccatgaagcctcaagacgagccaccg
actaaagctgcttctgaagaacaacactga
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