KEGG   Silene latifolia (white campion): 141618890
Entry
141618890         CDS       T11116                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf00040  Pentose and glucuronate interconversions
slaf01100  Metabolic pathways
Module
slaf_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    141618890
Enzymes [BR:slaf01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     141618890
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim pAdhesive_6 DUF3737 Nab2-zf4
Other DBs
NCBI-GeneID: 141618890
NCBI-ProteinID: XP_074292052
LinkDB
Position
X:334561568..334565500
AA seq 399 aa
MTKLPSTDLYLILTLITLITCAKGVIGGGTYNVQSLGGRPDGRTDSSKAFMAAWTSACDS
TGRSTILVPSGRFLVRNKIIFSGNRCKSDGITFVIKGTILAPSDFRVLGNSGTWLSFENT
NGVTLSGGVFDGQGAGLWACKRFRNGGCPSGVTTLGFTNSMNIIVDGVTSLNSQLYHIVF
NGCKNVKVQGVTISASGTSPNTDGIHVQMSMGVTILNSKISTGDDCISIGPGTNGLWIEG
IHCGPGHGISIGSLGKEQNEPGVQNVTVKTSTFTNTENGVRIKSWGRESNAFVRNVVFQH
LTMVNSQNPIIIDQNYCPGNKNCPKQVSGVRIDGVTYEDIHGTSATPVAVKLECSSRYHC
TGIILEDVHLTYGNNKPASAFCTNAIGSTSGVVQPNGCL
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgactaaattgccatcaactgatctatacttaatacttaccttaataacactaataact
tgtgctaaaggtgtaattggaggtggcacgtacaatgtacaaagcctagggggaagaccg
gacggtcgaaccgactcgtctaaggcatttatggctgcatggacctcggcttgtgattca
actggccggtccactatattggttccatcaggccggtttttggtccgaaacaaaataata
ttttcagggaataggtgtaagagtgatgggatcacgtttgttattaaagggacgattttg
gccccgtctgattttcgagttctagggaattcaggcacgtggttgtcgtttgagaatacg
aatggcgttacgctttccggtggggtgtttgatggtcaaggagctgggttgtgggcttgt
aagaggtttcgcaatggtggctgtcctagtggtgtcacgactctgggcttcacaaactca
atgaacataatagttgatggagtaacatcactaaatagtcaattatatcacattgttttc
aacgggtgtaagaacgtgaaagtacaaggcgttactatctccgcttccggtactagccct
aatacagatggcattcatgtccaaatgtcgatgggtgtcacaatcttaaactcaaaaatt
agcactggtgatgattgcatctccattggtccagggactaatggcttgtggatagaaggg
atccattgcggtccaggtcacggtattagcattggaagcttagggaaagaacaaaacgaa
ccaggagtacaaaatgtaacggtcaaaacgtcgacttttacaaatactgaaaatggagtt
agaataaagtcatggggaagagaaagtaatgcatttgttagaaacgttgttttccaacat
ttgactatggtcaattctcaaaatccaatcatcattgaccagaactattgtcccgggaat
aaaaattgtcctaaacaggtatcaggagtaagaatagacggggtaacgtacgaagatata
catggaacgtcagcaacaccagtagccgtaaaattggaatgcagttcaaggtatcattgc
acggggataatattagaagacgtacatttgacatacggtaataacaaaccagcgtcggcg
ttttgcaccaatgcaatcggctcgacttccggcgtggttcagcctaatggctgcctgtaa

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