Silene latifolia (white campion): 141618890
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Entry
141618890 CDS
T11116
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00040
Pentose and glucuronate interconversions
slaf01100
Metabolic pathways
Module
slaf_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141618890
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
141618890
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
pAdhesive_6
DUF3737
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
141618890
NCBI-ProteinID:
XP_074292052
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Position
X:334561568..334565500
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AA seq
399 aa
AA seq
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MTKLPSTDLYLILTLITLITCAKGVIGGGTYNVQSLGGRPDGRTDSSKAFMAAWTSACDS
TGRSTILVPSGRFLVRNKIIFSGNRCKSDGITFVIKGTILAPSDFRVLGNSGTWLSFENT
NGVTLSGGVFDGQGAGLWACKRFRNGGCPSGVTTLGFTNSMNIIVDGVTSLNSQLYHIVF
NGCKNVKVQGVTISASGTSPNTDGIHVQMSMGVTILNSKISTGDDCISIGPGTNGLWIEG
IHCGPGHGISIGSLGKEQNEPGVQNVTVKTSTFTNTENGVRIKSWGRESNAFVRNVVFQH
LTMVNSQNPIIIDQNYCPGNKNCPKQVSGVRIDGVTYEDIHGTSATPVAVKLECSSRYHC
TGIILEDVHLTYGNNKPASAFCTNAIGSTSGVVQPNGCL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgactaaattgccatcaactgatctatacttaatacttaccttaataacactaataact
tgtgctaaaggtgtaattggaggtggcacgtacaatgtacaaagcctagggggaagaccg
gacggtcgaaccgactcgtctaaggcatttatggctgcatggacctcggcttgtgattca
actggccggtccactatattggttccatcaggccggtttttggtccgaaacaaaataata
ttttcagggaataggtgtaagagtgatgggatcacgtttgttattaaagggacgattttg
gccccgtctgattttcgagttctagggaattcaggcacgtggttgtcgtttgagaatacg
aatggcgttacgctttccggtggggtgtttgatggtcaaggagctgggttgtgggcttgt
aagaggtttcgcaatggtggctgtcctagtggtgtcacgactctgggcttcacaaactca
atgaacataatagttgatggagtaacatcactaaatagtcaattatatcacattgttttc
aacgggtgtaagaacgtgaaagtacaaggcgttactatctccgcttccggtactagccct
aatacagatggcattcatgtccaaatgtcgatgggtgtcacaatcttaaactcaaaaatt
agcactggtgatgattgcatctccattggtccagggactaatggcttgtggatagaaggg
atccattgcggtccaggtcacggtattagcattggaagcttagggaaagaacaaaacgaa
ccaggagtacaaaatgtaacggtcaaaacgtcgacttttacaaatactgaaaatggagtt
agaataaagtcatggggaagagaaagtaatgcatttgttagaaacgttgttttccaacat
ttgactatggtcaattctcaaaatccaatcatcattgaccagaactattgtcccgggaat
aaaaattgtcctaaacaggtatcaggagtaagaatagacggggtaacgtacgaagatata
catggaacgtcagcaacaccagtagccgtaaaattggaatgcagttcaaggtatcattgc
acggggataatattagaagacgtacatttgacatacggtaataacaaaccagcgtcggcg
ttttgcaccaatgcaatcggctcgacttccggcgtggttcagcctaatggctgcctgtaa
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