Silene latifolia (white campion): 141619360
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Entry
141619360 CDS
T11116
Name
(RefSeq) putative E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141619360
04121 Ubiquitin system [BR:
slaf04121
]
141619360
Enzymes [BR:
slaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141619360
Membrane trafficking [BR:
slaf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
141619360
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141619360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
CxC4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
141619360
NCBI-ProteinID:
XP_074292484
LinkDB
All DBs
Position
X:complement(339648968..339651390)
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AA seq
318 aa
AA seq
DB search
MSSGGGNTHWCYQCQQPVCPRRRGTVCPHCDGGFLQELQECGAGAAAGGGRGGGGGSGGN
ISGRYASIANRDGPDQLFGIIEAFESLMLRSSPEHRVRLMETLDAFMGQSRSLLASREQV
PGRMSRSGGFEMFLNGNRPGTRGNNGDFFVQSGLHDLIQDLTVERRGPRGSVPAPQSAID
GMPTIKITRAHLQTDSHCPVCKDQFELGSEARQMPCNHIYHSDCIVPWLVRHNSCPVCRQ
EIGTGPNPSIGSRSAAGGNSRNDQNPGRRSPFSFLWPFRSSNTTNREYVETTRSSNPATT
TANGENHEMHYSGWPFDY
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtggtggagggaatacacactggtgttaccaatgccagcagccggtttgccct
cgaagacgaggcacagtctgtcctcattgtgatggagggtttctacaagagttacaagag
tgtggtgctggtgctgctgctggtggaggtagaggtggcggtggcggcagtggtggtaat
atcagtggtaggtatgcctcgattgcgaatagagatggtcctgatcaattgtttggaata
attgaagcgttcgagtctttaatgcttcggagtagcccggagcacagggtcagactaatg
gaaactttggatgcttttatgggccagagtaggtctttgttggcttctcgagagcaagta
ccgggtaggatgtctagaagtggtgggtttgagatgtttttgaatggaaaccgtccagga
actcgtggaaacaatggagatttttttgttcagtctggcttgcatgatttgatacaagac
ctaacggttgaaaggcgtggaccgcgtggttcagttccggctcctcaatctgcaattgat
ggaatgccgacgattaagataactagggcccacctgcagactgattcacactgccctgtg
tgtaaagatcagtttgaattgggctcggaagcaaggcaaatgccatgtaaccatatttac
cactctgattgcattgtcccttggttggtccggcacaactcatgccctgtttgtcgccaa
gaaataggcaccggtcctaacccaagtataggcagtagaagtgccgctggtggaaactcg
agaaatgatcagaaccccggaaggaggagtccattctcattcctgtggcctttccgctca
tcaaacactaccaacagagaatatgttgaaacaaccaggagcagcaacccagctacaacc
acagctaatggtgagaatcacgagatgcactattccggctggccttttgattactag
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integrated database retrieval system
