Silene latifolia (white campion): 141619674
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Entry
141619674 CDS
T11116
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03015
mRNA surveillance pathway
slaf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141619674
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141619674
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slaf01009
]
141619674
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141619674
03036 Chromosome and associated proteins [BR:
slaf03036
]
141619674
Protein phosphatases and associated proteins [BR:
slaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
141619674
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
141619674
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
141619674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
RSA-1_C
Phage_Inh_C
P2R3B_EF-hand
DUF5539
DUF4187
DUF929
CC_TSC1
Motif
Other DBs
NCBI-GeneID:
141619674
NCBI-ProteinID:
XP_074292791
LinkDB
All DBs
Position
X:complement(343399976..343410442)
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AA seq
539 aa
AA seq
DB search
MDMDFNGDLSCLDAEMLQLSEISPLALKSNPYIAQELFEQWLSLPDTNRLVKSLVNDAKA
GNNLNVSGNASCTNAAATNAIPSMFPAGSAPPLSPRSSSGSPRVVKPKTGPSSLGSPLKV
LSEPVKELIPQFYFQNGRPAAKELKERCLFRINQIFYDHMEGLQMSEFKVVTKEICKLPS
FINPVLFQKIDVNGAGFVTRDAFVDYWVNGNLLTMDIAMQIYTILKQPDHMFLSQDDFKP
VLKELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRAGNGQLTLRELKRGNLIGAMQ
HADEEEDINKVLRYFSYEHFYVIYCKFWELDSDHDFLIDKENLIRYGNHALTYRIVDRIF
SQVPRKFTSTVEGKMGYEDFVYFILAEEDKSSEPSLEYWFKCVDLDGNGVLTRNEMQFFY
EEQLHRMECMAQEPVLFEDILCQIIDMIKPENESFVTIRDLKGNKLSGSVFNILFNLNKF
MAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggatatggatttcaatggagatttgtcgtgtttagacgcagaaatgttgcaattatca
gaaatttcacctttggcgctaaaatctaatccttacattgcgcaagaactatttgaacag
tggttatcgcttccggatactaatcggctggttaaatcattagtcaatgatgcaaaggca
gggaataatttaaacgtctctgggaatgcttcctgtacaaatgctgctgctaccaacgct
attccttcaatgtttcctgctgggagtgcgcctcccctttcaccaagaagttcatcagga
tctcctcgtgtcgtgaaaccgaagactgggccttcttcccttggaagtcctcttaaagtg
ctgagtgagcccgtgaaagagctgataccacagttctattttcagaatggtcgtccagcc
gctaaagaattgaaggaacggtgtctgtttagaataaatcagattttttacgatcatatg
gagggcttgcagatgagtgagtttaaggttgtcacaaaggaaatttgcaagctgccttca
tttatcaatcccgtcctcttccagaagattgatgtcaatggagcaggatttgtcaccagg
gatgcttttgttgattattgggtcaatggcaatttgctcacgatggacattgcaatgcaa
atttatactatcttgaaacagccagaccacatgtttctctcacaggatgactttaaacct
gttctcaaagaacttttggcaacccatcctggattggaatttttacagagcaccccggag
tttcaggagagatatgcggaaactgtaatatacagaatattttactacatcaatagagca
ggaaacggtcaattaactctcagggagctgaagcgtggaaacttgattggtgccatgcaa
catgcagatgaagaggaggacatcaacaaagttctgaggtacttctcatatgagcacttc
tatgtgatatactgcaaattctgggagctggattcggaccatgattttttgattgacaaa
gagaacctaatcagatacggaaaccacgcacttacttacaggattgttgatagaatattt
tcccaggttcctagaaagttcaccagtactgttgaaggcaagatgggatatgaggatttt
gtttatttcatacttgcagaggaggataaatcatcagaacccagtcttgaatattggttt
aagtgtgtagatttagatggaaatggagttctaacaagaaatgagatgcaatttttctac
gaggagcagttacatcgtatggagtgcatggctcaggagcctgtacttttcgaagatatc
ttatgccagattattgacatgattaaacctgagaacgagagtttcgtcactattcgcgac
ttgaaagggaataagctttcaggaagtgtatttaatatcctctttaacctaaataaattc
atggcatttgaaactcgcgatccattccttattcgccaggagagagagaatccaacattg
acagaatgggatcgctttgcacatagagagtatattaggctttcaatggaagaggacgtc
gaagatgcttccaatggaagtgctgaagtttgggacgaatctttggaggctcccttttga
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