Silene latifolia (white campion): 141619727
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Entry
141619727 CDS
T11116
Name
(RefSeq) peroxisome biogenesis protein 12-like
KO
K13345
peroxin-12
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
141619727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141619727
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
141619727
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
PRIMA1
zf-rbx1
zf-RING_6
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
141619727
NCBI-ProteinID:
XP_074292848
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Position
X:344129374..344142292
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AA seq
393 aa
AA seq
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MLFQVGGQGTRPTFFEMAAAQQLPSSLRSALAYSLGVMALRRPILHKVLDYEDEFFALLM
LVLETHSVRTTDASFAESLYGLRRRAVKIKMKKDDPRSDSTEGIQLSGLEKNQRVLSVVF
LVVLPYFKSKLHSIYNKERESALHASLWGSSDERFDDTDYLDTAGSPVDQSRASDAELSS
RARILRGAKKLIGVCYPLIHAGHEGATFAYQLLYLLDATGFYSLGLQALGIHVCRATGQE
LMDASSRISRMRSRERERLRGPPWLKKIQGAFLTSMYAVLDYAQTGLIAAVFIFKMMEWW
YQSAEERMSAPTIYPPPPPPPAPRVAKEGIQLPSDRTVCPLCSEKRANPSVVTVSGYVFC
YGCIFKYISQYKRCPVTLIPAEVEDVRRLFHDM
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgttgttccaggtaggaggacaaggtacgcgccctaccttcttcgaaatggccgccgct
caacagcttccttctagtttacgctccgctctcgcttactctctcggtgtgatggctctc
agaaggccgattttacataaggtgttggactacgaggatgagttctttgccttgttgatg
ttagttctcgaaactcatagcgtcagaaccacagatgcttcgtttgcggagtctttatac
gggttgcgtagaagagcagtaaaaattaaaatgaaaaaagatgatccccgttctgactcc
acggaaggaatccagctctcagggttagaaaagaatcaaagggtcctttcagttgttttt
ctggttgtgttgccatattttaagtcaaagttgcattctatatataataaggagagggag
tctgcactgcatgcgagtttatggggatcaagtgatgaaagatttgatgatactgactac
ctagatacagctgggagtccagttgatcaaagtagagcttcagatgctgagctatcatca
agagcacgcatcttaaggggagctaagaaacttataggtgtttgttaccctttgatacac
gctgggcatgaaggtgcaacatttgcttaccaactgttgtatctattggatgcaaccggc
ttctattcgcttggactgcaggccttagggatccatgtgtgtcgtgctactggacaggaa
ctgatggatgcttcttcaagaatatcgaggatgaggagccgtgaacgtgagaggcttcgg
ggccctccttggcttaagaaaatacagggagcatttctcacctctatgtatgcagtgctt
gattatgcgcaaactggtttaattgccgcggtattcatattcaagatgatggaatggtgg
taccagtctgctgaggagagaatgtcagctccaaccatctaccccccaccacctccgcct
ccagccccaagagtggccaaggaaggtattcaattgccatctgatagaacagtttgtccg
ttgtgctcggagaagcgtgcaaatccctctgttgtaacagtttcaggatacgtcttctgt
tatggttgcatatttaagtacatttctcagtataaaaggtgccctgtaacactcatccct
gccgaagttgaggacgttagaaggcttttccatgacatgtag
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