Silene latifolia (white campion): 141619783
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Entry
141619783 CDS
T11116
Name
(RefSeq) farnesyl pyrophosphate synthase-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00900
Terpenoid backbone biosynthesis
slaf01100
Metabolic pathways
slaf01110
Biosynthesis of secondary metabolites
Module
slaf_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
141619783
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
slaf01006
]
141619783
Enzymes [BR:
slaf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
141619783
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
141619783
Prenyltransferases [BR:
slaf01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
141619783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Zein-binding
Motif
Other DBs
NCBI-GeneID:
141619783
NCBI-ProteinID:
XP_074292901
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All DBs
Position
X:complement(345021569..345024660)
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AA seq
343 aa
AA seq
DB search
MSSELRTRFLQVYEVLKSELLSDPAFEWTPDSTQWVDRMLDYNVPGGKLNRGLSVIDSYS
LLKQGQDLTDDEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRLPKVGIIAA
NDGVILRNHIPRILKNHFRDKTYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYS
LDLHRRIVQYKTAYYSFYLSVACALLMSGEKLEDHIDVKNILIDMGVYFQVQDDYLDCFG
DPEFIGKIGTDIEDFKCSWLVVKALELCNDEQKKFLHENYGKQDAACVAKVKELYHHLDL
QGVFAEFEKQSYEKIVNSIEAHPSKSVQAVLKSFLAKIYKRQK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaattaaggacaagatttctacaagtatatgaagttctgaaatcggagctc
cttagtgatcctgcttttgaatggacacctgattccacccaatgggttgaccggatgctg
gactataatgttcctggtggtaagctcaatcgaggactatcagttattgacagttactct
ttgttgaagcaaggacaagacctcactgatgatgaaatctttctcgcttctgcccttggc
tggtgcattgaatggcttcaagcttattttcttgttcttgatgatattatggacaactct
cacacccgccgtggccagccttgctggtttagactccctaaggttggcattattgctgcc
aacgacggtgtcatccttcgcaaccatattcccagaatcctcaagaatcattttagggac
aaaacttactatgtagatttgttggatttatttaatgaggttgaattccagactgccagt
ggacagatgattgatctcataaccactcttgaaggagaaaaagatctttctaaatattct
ttggatcttcaccgccgcattgttcagtacaaaaccgcttactattcattctatttatca
gttgcatgtgctttactcatgtcaggtgaaaaactcgaagaccatattgatgtcaaaaac
attcttattgacatgggagtatatttccaagtacaggatgactatcttgattgttttgga
gaccctgaatttatagggaagattggaactgacatagaagattttaagtgctcttggttg
gttgtcaaagctttggaactatgtaacgatgaacagaagaaatttttacatgaaaactac
ggcaagcaagatgcagcctgtgtggcaaaagtgaaagagctttatcatcaccttgatctc
cagggtgtttttgcggagtttgagaaacagagttatgagaagatagtaaactccattgaa
gcgcatccaagcaaatcagtgcaggctgttctcaagtcatttttggcaaaaatatacaag
aggcagaaatga
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