Silene latifolia (white campion): 141622306
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Entry
141622306 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141622306
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
141622306
Enzymes [BR:
slaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
141622306
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
141622306
NCBI-ProteinID:
XP_074294460
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Position
X:3520599..3525725
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AA seq
663 aa
AA seq
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MKSLTFLALQFSLLCYCFANVQENAPAVTLHIRHKQVVIDNGILQLTISNPEGYLTAISY
AGLDNLLETRNKPSNRGYWDVVWDDTSHGYGSITDWILGTDFEVIVNNEDQVEVSFTSKW
GSTAWTTSDGNRRLPINVDRRYIVLRGSSGFYAYAILEREEGYPASNIYQIRTVYKLDKD
KFHYMAISDDRQRIMPMPEDRVSGLPLAYREAVLLTNPMDSDLRGEVDDKYEYSSEYKDN
YVHGWISFESKIGFWIITPSNEFRSAGPVKQDLTSHVGPTALAMFHSNHYAGLDVTMRFQ
EGEPWKKVFGPYHVYLNTASEGIDVHTLWDDAKQQTAQELGHWPSEFPMSDDFAKSAQRG
SVFGQLLMSHRYSWKTPRAASSAWIGLAAPGDAGSWQTETKGYQFWSQSDENGRFLIKEI
RAGVYNLYAWVPGIIGDYIYAEKITVTPGSAINLGDVEFEALRNGPTLWEIGYPDRSAQE
FYVPTPSSIFVNKLYTDSDVNRFRQYGLWERYAELYPDEDLVYTVGASDYRTDWFFAHVT
RKLDKGIYVPTTWQIIFHLDDIIPSSTYTLRIALASASRSELQVRFNDPELSVPHFTTKL
IGSDNVIARHGIHGLYRLFSIDVRSDWLSIGKNTIFLKQSRHIGPFEGVMYDYIRLEGPP
PTK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtctaactttccttgctcttcagttctccttgctttgttattgttttgcaaat
gtccaggaaaacgcacctgctgtcacattgcatataagacacaaacaagtggtaatagac
aatggtattctccaactcactatttcaaatccggagggttatctcactgccatttcttac
gctggtctcgacaatttacttgaaactcgtaacaaaccatcaaatagagggtactgggac
gtagtctgggacgatacatcacatggttacggaagtataactgactggatactaggaacg
gactttgaagtcatcgtaaataatgaggatcaagttgaggtttcatttacaagtaaatgg
ggttcaaccgcgtggactacatcagatggtaaccgcaggcttcctataaatgtcgatcgc
aggtatattgtacttcgcggatcctctggattctatgcctacgctattttagagcgtgaa
gaagggtatcctgcatcaaatatctaccaaataagaactgtttataaactcgacaaagac
aagtttcattacatggctatttcagacgacaggcagcgaatcatgcctatgccagaagat
cgggtgtctggtctgcctcttgcctatagagaagccgtgcttttgactaatccaatggat
tcagatctcagaggagaggtggatgacaaatacgagtactcatccgaatataaagacaat
tatgtgcatgggtggatatcatttgaatcaaagataggtttctggatcataacacctagc
aacgagtttcgttctgcaggacctgtcaagcaagatctcacatcccatgtcggtccaact
gcgttagctatgttccacagtaatcactatgctggattagacgtaacaatgcgatttcaa
gaaggcgaaccttggaaaaaggtgttcggcccatatcatgtctaccttaatacagcatca
gaaggcatagatgtacatacactctgggatgatgcaaaacagcagacggcgcaagaatta
ggacactggccttcagaattcccgatgtcagacgactttgctaagtctgcgcagcgtggt
tctgtatttggtcagctgctaatgagtcacaggtacagctggaagacgccaagggctgcc
agttcagcttggattggactggcagcacctggtgatgcgggatcctggcagaccgagact
aagggatatcaattttggagtcaatctgacgaaaatggacgtttcctgataaaagaaata
cgtgctggtgtttacaacttgtacgcttgggttccaggcatcattggcgattacatatac
gctgaaaaaatcacagttactccaggatctgcgatcaatttgggtgatgttgaattcgag
gctcttagaaatggaccgacattgtgggaaataggttatccagaccggtcagctcaggaa
ttctatgtacctacgccaagtagcatatttgtaaacaaactctacacggatagtgatgtg
aaccggttcagacagtatggtctctgggaacggtatgctgagctttaccctgacgaagat
cttgtatacaccgttggtgctagtgactatcgtacagactggtttttcgctcatgttact
aggaagcttgacaagggtatatatgtaccaacaacttggcagattatttttcatctcgac
gacataataccttcttcaacctacactttgcgaattgccttggcatctgcttctaggtct
gaactgcaagttcgattcaacgatccggaattgagcgtacctcatttcacaacaaagcta
ataggatcagataatgtaattgcaagacatggtattcacgggttatacaggttgttcagc
attgatgttcgtagtgactggcttagtatcggaaaaaatacaatatttctcaagcaatcg
agacatataggtccgtttgaaggggtaatgtacgattatattcggttagaagggccgcca
ccaacaaaatga
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